KEGG   Phoenix dactylifera (date palm): 103708324
Entry
103708324         CDS       T03274                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103708324
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103708324
Spliceosome [BR:pda03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103708324
 Complex B
    103708324
 Complex C
   U2 SnRNP specific factors
    103708324
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 103708324
NCBI-ProteinID: XP_008791422
UniProt: A0A8B7C472
LinkDB
Position
11:1689502..1701967
AA seq 504 aa
MSSTLLEVTRAAHEDVERLERLVVKELQREPANNRERLFQNHRVRHMIDLIRITSDKLVE
IYEDKDNARRDEIAALGAGGPNNCFPAFYDRLKEIRDYHRRHPAARVVDANEEFEELLKE
EPQIEFSGEEAFGRYLDVHELYNKYINSKFGEPMEYSVFLETFSQTHKIPRNLKLTRQYR
EYLEHVLEYLISFLERTQPLQDLGRIFTKVEAEFEEQWADGKVLGWENKGTENGHVSSQE
SVIDLDYYSTVEELMEVGPEKLKEALAACGLKTGGTLQQRAERLFLTKHTPVEQLDRKHF
AKGSRGLEQNGVAEETNSKKEIALVEAKMQRLCELLKETIIQTKENVIKKQALTYEEMEA
ERGEEEIQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYW
GRRAFERHFKEWRHQHGMRCLNIPNTKNFNEITSIQEAKDLWEKIQERQGLIKWRPDLEE
EYEDREGNIYNRRTYTDLQRQGLI
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtcttcgacccttctcgaggtgacgcgggccgcccacgaggacgtggagcggctcgag
cggcttgtcgtgaaggagctccagagggagccggccaacaatcgggagcgcctcttccag
aatcaccgcgtccggcacatgattgatctaatcaggatcaccagcgacaagctcgtcgag
atatatgaggacaaagacaatgcgaggcgagatgagattgcggcgctgggagcgggtggc
ccgaacaattgttttcctgctttctatgaccgtttgaaggagattcgcgactaccatagg
cgacatccagctgcacgcgtggttgatgcgaatgaagaattcgaagagttactgaaggaa
gagccacaaattgaattcagcggagaggaagcttttggtcggtacctggacgtgcatgaa
ttatacaacaagtacatcaactcaaaatttggagagcctatggaatactctgttttcttg
gagacattttctcagacccacaaaattcctcgcaatctgaagttgaccaggcaatataga
gaatatttggagcatgttctggaatatctgatttcatttttggagcgtacacagcccctg
caagaccttgggagaatatttacaaaggtggaggcagagtttgaagagcagtgggctgat
ggtaaggtacttggatgggaaaacaaggggacagaaaatgggcatgtttcatcacaagag
tctgtgatcgatcttgattattacagtacagtggaagaacttatggaagtgggccccgaa
aaattgaaagaggccttggctgcttgtggattgaaaactggtggtacacttcagcagcgt
gcagagcgcctttttctgacaaagcacacacccgtggagcaattagacagaaaacatttt
gctaaaggttcacgtggtttggagcaaaatggagttgcagaagagaccaactctaagaag
gaaattgctttagtggaggcaaagatgcaacggttgtgtgaattgctaaaagagactatc
atacaaacaaaggaaaatgtcataaagaaacaagctttgacttatgaggaaatggaagct
gaacgtggagaggaagaaatacaagctgatactgagagtgatgatgaagagcagcaaatt
tacaatcctctgaagttgcctatgggttgggatggcaagcctataccctactggctttac
aagcttcatggtcttggccaggaattcaagtgtgaaatatgtgggaattatagttattgg
ggtcggagagcatttgagcgtcatttcaaggagtggaggcaccagcatggaatgcgttgt
ctaaatatacctaacactaagaacttcaatgaaattacatctattcaggaagcaaaggat
ctgtgggagaaaatacaagaacggcaaggattgatcaagtggcgcccagaccttgaagaa
gagtatgaagacagggagggtaacatctataataggagaacatacactgacctgcagcgc
caaggcctcatctaa

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