KEGG   Phoenix dactylifera (date palm): 103710412
Entry
103710412         CDS       T03274                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03013  Nucleocytoplasmic transport
pda04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103710412
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103710412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pda03019]
    103710412
   04131 Membrane trafficking [BR:pda04131]
    103710412
Messenger RNA biogenesis [BR:pda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103710412
Membrane trafficking [BR:pda04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    103710412
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    103710412
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    103710412
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR35_TULP_N Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_Vps41 WDR55 ANAPC4_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C EIF3I Beta-prop_HPS5 NBCH_WD40 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_2nd Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 103710412
NCBI-ProteinID: XP_017699106
UniProt: A0A8B7MUK3
LinkDB
Position
7:complement(2404610..2406812)
AA seq 302 aa
MPSQKIETGHQDVVHDVSMDYYGKRLATASSESTIKIIGVSGSSHQHLATLTGHQGPVWQ
VAWAHPKFGSMLASCSYDGRVIIWKEGSKPDEWAQAHIFTEHKSSVNSIAWAPHELGLCL
ACGSSDGNISVFTARTDGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGSGQLDPVQKLA
SGGCDNTVKVWKLYNGSWKMDCFPALQMHSDWVRDVAWAPNLGLPKSTIASASQDGTVVI
WTVAKEGDQWDGKVLNDFKAPVWRVSWSLTGNILAVADGNNIVTLWKEAVDGEWQQVTTV
EP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgccttctcagaaaatagaaacaggtcaccaagatgtggtccatgatgtgtcaatggac
tactacggcaagcgcctggccacagcctcttctgaatctaccatcaagattattggagtc
agtggctcctcgcatcagcatcttgctaccttgacaggccatcagggtccagtctggcag
gtagcatgggcccaccccaagtttggatcgatgcttgcctcttgcagctatgatggccgc
gtgatcatatggaaggaagggagcaagcctgatgagtgggctcaggcacacatcttcact
gaacacaagtcctctgtcaattcaattgcatgggcaccccacgagcttggcctctgcttg
gcatgtggttcctcagatgggaacatctcggtctttactgctcgaacggatggaggttgg
gacactactaggattgatcaagcccacccagttggagttacttctgtctcgtgggctcca
gcaatggcaccaggtgcccttgtcggttcgggacagcttgatcctgtccagaaacttgca
tcgggtggctgcgataacacggttaaggtgtggaagctgtacaatgggagctggaagatg
gattgctttcctgctcttcagatgcactctgactgggtgagagatgtggcttgggcacca
aatttggggctcccaaagtctactattgctagtgcttcacaggatgggactgtggttata
tggacagtggcaaaggaaggtgatcagtgggatggtaaagttctgaatgattttaaggcc
cctgtttggagggtgtcgtggtcattgacagggaacatcttggctgtagctgatgggaat
aacattgttacattgtggaaagaagcagtggatggggagtggcagcaggtgacaacagtt
gagccttag

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