Phoenix dactylifera (date palm): 103720113
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Entry
103720113 CDS
T03274
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03440
Homologous recombination
pda03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103720113
03460 Fanconi anemia pathway
103720113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pda03032
]
103720113
03400 DNA repair and recombination proteins [BR:
pda03400
]
103720113
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
103720113
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Topoisomerases
103720113
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
103720113
FA (Fanconi anemia) pathway
103720113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
103720113
NCBI-ProteinID:
XP_008807898
UniProt:
A0A8B7CWV8
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MTMPGGRGRIRVLNVAEKPSVAKAVAEILSRRGGGFRSREGRSRYNRVFEFEYAIGPQLC
HMLVTSVTGHLMELEFDDRFRKWHSCDPADLYHAAVRKHVPQDKLDIKRTLEEEARSCQW
LVLWLDCDREGENIAFEVMEVCTSINHRLNVWRAHFSALIDREIHEAVQNLGRPNKLFAD
AVDVRQEIDLRIGASFTRFQTMLLRDAFVLDFAGDDRNVVLSYGPCQFPTLGFIVERYWE
IQSHEPEEFWTINCSHTSDEGTTTFSWMRGHLFDYTSAVIVYEMCVEESTATVMNVRNQE
KLKYPPYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGYISYPRTETDSFSVNTDLHA
IVGEQVGHPAWGSYAQRLLDPEASLWRNPSNGGHNDKAHPPIHPTKFSAGEPGWSQDHNR
LYELVVRHFLACVSKPAVGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFESWGGTILP
TYTIGQQFIPTTLTLDSGVTRPPQLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCYAT
KDSNTRFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSIGSKRKSEVLEGCLQQ
MKACFLDARLNRVKLFEAMELFFERSNRSGADTHNIGETVRPCDSCHESDMVLKRRPSGD
FMVGCLRFPLCRNVVWLPGSISEAAVTSEVCPTCAPGPVFLIQFKFRRLEIPPNYDVDHL
GCIGGCDVALRELAEICGTGSRNNTGMTARAQRSTEPPSSTRRGNSRQDSCMYCRRTGHS
SNDCPSQVSHSHGAPSIRIQKSRNGSGQVLCSCGAPCALRTANTETNRGRKFYTCQSQEC
GFFVWEDSLENGGTHGCGASHGSSSRASSTARRGGRGRGQGGARTGGVTFVSATGEPVSG
SCFVCGDPSHFANVCPNRGS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccggggggacgcggccggatccgggtgttgaacgtggcggagaagccgtcg
gtagcgaaggcggtggcggagatcctgtcccgccgcggcggagggttccgttcccgggag
gggcggtcgcgatacaaccgggtgtttgagttcgagtacgccatcggcccccagctctgc
cacatgctcgttacctccgtcaccggccacctcatggagctcgaattcgacgaccgcttc
cgcaagtggcactcctgcgatcccgccgacctctaccacgccgccgtccgcaagcacgtt
ccgcaggacaagttggatatcaaaaggactttggaggaggaagctaggagttgccagtgg
cttgttctgtggcttgactgtgatagagaaggtgagaatattgcgtttgaagtgatggag
gtttgcacgtcaataaatcatcgcctcaatgtgtggagagctcatttctcagcattgatt
gacagggaaatacatgaagcagtgcagaatcttggtcgacccaacaaattgttcgcagat
gcagtggatgtcaggcaggaaattgatctccgcataggtgcttcatttactaggtttcag
acgatgctgctcagagatgcatttgttctggattttgctggggatgacaggaatgttgta
ttaagttatggtccttgtcagtttcctactcttggttttattgtggaacgctattgggag
atacaatctcatgagccggaagaattttggacaattaactgctctcacacatcagatgag
ggcactactactttcagttggatgcgcgggcatttgtttgactacacatctgctgttata
gtttatgagatgtgtgttgaagaatcaactgcaactgtcatgaatgtcaggaaccaggag
aagcttaagtatcccccatacccattgagtactgttgagcttcagaaacgtgcctctaga
tatttcaggatgagttctgagcacacaatgaaggtagctgaagagctttatcaggctgga
tatattagttatcctcgtacggaaacagatagcttctcagtgaacacagacctacatgcc
attgtgggggagcaagtgggacatccagcttggggttcatatgctcaaagacttttggat
ccagaggcaagtctttggagaaaccccagtaatggtggacacaatgacaaggcacatcct
cctatccatcctacaaaattttctgctggtgaaccagggtggagtcaagaccataataga
ttgtatgagcttgtggtgcgccatttccttgcttgtgtctcaaaacctgctgtaggagct
gaaactacagttgaaattgacattgctggtgaacaattttctgcatctggacgtgtgata
atagcgaaaaattacttggatgtctatagatttgaatcttggggaggtactatactccca
acatacacaattgggcaacagtttattccaacaactttgacacttgattcaggggtgaca
agaccaccccaacttttaagtgaagctgatttgcttagttgtatggacaaggcaggaatt
ggcacagatgcaacaatgcatgatcacatcaaaaagctacttgatcgatgttatgcaacc
aaagattcaaatacacgtttctcgccaacaaatcttggcgaggcgttggtaatgggctat
gatgagatggggtatgagctttggaagccgttccttagatcaatgatggagtgcgatatg
aaagcagttagtataggttcgaagaggaaatctgaagttctggagggttgcttgcagcag
atgaaagcttgttttttagatgcaaggctgaatagagtgaaactctttgaagcaatggag
ttattttttgaaagatctaatagatctggtgcagatacacataatatcggagagactgta
aggccgtgtgattcgtgtcatgaatcggatatggtgctgaagcgaagaccgagtggtgac
tttatggttggatgtttgcgctttccattgtgtaggaatgtggtttggctcccaggatcc
atttcagaggcagctgtaactagcgaagtttgccccacttgtgctccaggtcctgttttt
ctgattcaatttaagtttcgtcgactggagataccaccaaactatgatgttgatcattta
ggttgcattggtggctgtgatgttgcacttagagaactagcagagatttgtggaacagga
tctcgaaataatactggtatgacagcaagagcacagagatccacagaacctcctagtagt
acaaggcgaggaaattcaaggcaggattcttgtatgtattgcaggcgaacagggcattct
tcaaatgattgcccctcccaggtttcccattcacatggagctccatccattcgcatccaa
aagtcaaggaatggttcaggccaagtcttgtgtagttgtggagcaccatgcgcattgaga
actgctaacacagaaactaatagaggaaggaagttctacacatgccaatctcaagaatgt
ggtttctttgtatgggaagatagtctggagaatggtggaacgcatggatgtggagcatct
catggaagcagtagcagggcatcgtccactgcaaggagaggcggtcgtggccgaggacag
gggggagcacgcactggtggtgtaacatttgtttctgcaactggtgagccagtatctggt
agttgtttcgtctgtggtgatccctcacactttgcaaatgtatgcccaaatcgtggcagt
tga
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