KEGG   Phoenix dactylifera (date palm): 120103925
Entry
120103925         CDS       T03274                                 
Name
(RefSeq) DNA repair protein RAD5A-like isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
pda  Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:pda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pda03400]
    120103925
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    120103925
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-RING_UBOX zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 ResIII zf-RING_4 zf-ANAPC11 UBA_Rad5 DUF3614 UBA
Other DBs
NCBI-GeneID: 120103925
NCBI-ProteinID: XP_038986600
UniProt: A0A8B9AJT5
LinkDB
Position
10:296573..316032
AA seq 1035 aa
MGNKATDEQIAVVRSVVGRDFSDIDIIRALHMANNDVAAAINIIFDTPHIRLTGEPTASA
TTTAAAARKKSLTPPVAPDRKGLVRSTNMDLAVDRNPDNGAVRPSGPATSRASDSDWWLV
GSSELAGLSTCKGRRLKAGDRVTFSFPSANTSTSSSSTARFPGRGRSPASCSEIVRFSTH
EHGEIGRIPNEWARCLLPLVRANKIRIEGSCKSAPDALGIMDTILLSVSVYINSSMFRKH
HQTSVKPSRPASEESTVHALPNLFRLLGLTPFKKAEITPEDLYARKRPMASKDSSGVLSA
VLPSEKCRKVSSSGSKIENDQEIISDPDLDNIVGISDSSLLEEMVPPETLQCELRPYQKQ
ALHWMVQIEKGRCFEEAATTLHPCWDAYRLVDKRGLVVYLNAFSGDATIEFPSTLKIARG
GMLADAMGLGKTIMTIALLLAHPNKGCSPTSPASQASHEANEMSHMSDQSPNDSKKLTGI
SGFSKLLKHKATLVGGGSLIVCPMTLLGQWKAEIEAHVQPAALTVYVHYGQSRPKDAKYL
AQSDVVLTTYGVLASEFSAENAEDNGGLYSVQWFRIVLDEAHTIKSSKSQISMAAAALTA
DRRWCLTGTPIQNNLEDIYSLLRFLKVEPWGNWGLWHKLIQRPYEEGDERGLKLVQSILK
PIMLRRTKSSTDRDGRPILVLPPANVEVLYCEMSAAEKDFYEALFRRSKVKFDQFVEQGR
VLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSNLNKLAKRFLKGGKDADSRDSGAVP
SRAYIKEVVEELRKGEEGECPICLEAFEDAVLTPCAHRLCRECLLASWRSTTSGLCPVCR
KSMNRQDLITAPTDNRFQIDIEKNWVESSKVSVLLRELENLRSLGAKSIVFSQWTAFLDL
LQIPLSRCNLTFVRLDGTLNQQQREKVINNFSEDENILVLLMSLKAGGVGINLTAASNAF
LMDPWWNPAVEEQAVMRIHRIGQTKNVFIKRFIVKGTVEERMEAVQARKQRLISGALTDQ
EVRTARIEELKMLFT
NT seq 3108 nt   +upstreamnt  +downstreamnt
atggggaacaaggccacggacgagcagatcgccgtcgtccgctccgtggttggccgggat
ttctcggacattgacataatccgcgcccttcacatggccaacaacgatgtcgctgcggcc
atcaacatcatcttcgacaccccgcacatccgcctcaccggcgaacccaccgcctccgct
accactaccgccgccgccgcccgaaagaaaagcctcactccccccgtggctccagatcgc
aaagggctcgttcggagcaccaacatggatctggctgtggaccggaatcccgacaatggc
gcggtgcggccatccggacctgctacctccagggcatcggacagcgactggtggctcgtc
ggaagctccgagcttgctgggctgtccacctgcaaggggaggcggctcaaggctggcgac
agggtcaccttctccttcccttccgcaaatacctcgacttcttcttcttcaaccgcaaga
tttcctggccgagggcggtccccggcttcttgttctgagatcgtgcggttctccactcac
gaacacggagagattggtcgcatcccaaacgagtgggctcgttgccttttgcctcttgtg
agggcgaataagatcaggatcgaaggtagctgtaagtctgctccagatgcccttggcatc
atggacactattctcttgtcagtcagtgtatacatcaacagttcgatgttccgcaagcac
catcagacatcagtgaagcctagtcgtcctgcctccgaggagtctacagttcatgcactt
ccaaacctgtttagattgctcgggcttactcctttcaagaaggctgagatcactccagag
gacctttacgctaggaaacggcccatggcctccaaggacagctctggagtgctttcagca
gtgttaccttcagaaaaatgtagaaaagtatctagcagtggaagtaaaatagaaaatgat
caggagattatttcagatcctgatttggataatattgtcggaatctcagacagctccctg
ttagaggaaatggtgccaccagaaactctgcaatgcgagctacgtccttaccaaaaacag
gctctccactggatggtgcagattgagaaaggaagatgctttgaggaggcagcaacaact
cttcacccatgttgggatgcgtaccgccttgtggataagagaggacttgttgtttacttg
aatgcattttcgggtgatgctactattgaatttcctagcaccctcaaaattgcgagagga
gggatgctggcagatgcaatgggactaggaaagacaattatgacaatagctcttcttctt
gcccatcctaataaagggtgctcacccacttctcccgcaagtcaggcctctcatgaagct
aatgaaatgagccacatgtctgatcaatctccaaatgattcgaagaaactaacaggcatt
tctggcttcagcaagctgttgaaacataaggccacacttgtaggtggcggtagtctaatt
gtttgtcctatgacattgcttggccaatggaaggctgagattgaagcgcatgttcagcca
gctgctctcactgtttatgttcactatggacaaagcaggccgaaggatgcaaaatatcta
gcacagagtgatgttgtcctgaccacctatggtgtgttagcatcagaattttctgctgag
aatgctgaagataatggtgggctttactctgtccagtggttcaggattgtgcttgatgaa
gcacatactataaaatcatctaaaagccaaatttcaatggccgctgctgctctcactgct
gatcggcggtggtgtctcacaggcacacctattcagaacaacctggaggatatatacagt
cttcttcggtttttgaaagtagagccttggggaaactgggggctgtggcataaactcata
caaaggccatacgaggaaggtgatgaacgtggattaaagctggtgcagtccatcttaaag
ccaataatgttaaggagaacgaagtccagcacagatagagatggcaggccaatccttgtt
cttcctccggcaaatgttgaagtactttattgcgagatgtcagcagccgagaaggacttc
tatgaggctctgtttagaagatcaaaggtaaagtttgatcagtttgttgagcaagggcgt
gttcttcacaattatgcttcaatattggagctgcttttacgccttcgtcaatgttgtgat
catccattccttgtaatgagtcgaggtgatacgcaagaatactccaatctcaacaaactt
gcaaagcggttccttaaaggtggtaaggatgctgatagcagagattctggtgctgtccct
tcaagggcatacattaaagaggtagtggaagagttgcgtaaaggcgaagaaggagagtgt
ccaatttgcctagaagcttttgaagatgcagtactaacaccatgtgctcaccgtttatgc
cgagaatgcctcttggctagctggcggagcaccacgagtggtctatgtcctgtttgtagg
aagtccatgaataggcaggatcttataactgctccaactgataatcgattccaaatagat
attgagaagaattgggtagaatcctccaaagtttcagttcttcttcgggaactggaaaac
cttcgcagtcttggtgccaaaagcattgtttttagccagtggactgcttttttggatctt
ctccagatccctctttctcgatgtaatctcacatttgttcgattggatgggaccttaaat
cagcagcaacgggaaaaagtaataaacaacttttcagaggatgagaacatattggtatta
cttatgtcattaaaggctggtggtgttggaataaaccttactgcagcatctaatgccttt
ctcatggatccctggtggaacccagctgttgaggaacaggctgtgatgcgcattcatcgt
attggtcaaactaagaatgtatttatcaaaagattcattgtaaagggaacagtggaggaa
agaatggaagctgtgcaggcacgaaaacaaaggctgatctctggggccctaaccgatcag
gaagttcgcactgcacgcatagaagaactgaaaatgctcttcacttag

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