Paramisgurnus dabryanus (large-scale loach): 135729300
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Entry
135729300 CDS
T10799
Name
(RefSeq) nephrocystin-4-like isoform X1
KO
K16478
nephrocystin-4
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
Cilium and associated proteins [BR:
pdab03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
135729300
BRITE hierarchy
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GFIT
Other DBs
NCBI-GeneID:
135729300
NCBI-ProteinID:
XP_065102915
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Position
Unknown
AA seq
1426 aa
AA seq
DB search
MSEWKEVFDRNRVIPPHSQTARQAQVSSHGLKLHFKQIDGLHVKQSEEQHALRCQLRVTL
YDSGHQHFFGRTWKSGSHSVSGTAGQIGRVPFNEVVYFHTSLCLSSVVAVVELVFLSTRP
DGSQNAVGSGFGLLQLFTGHVDTIISQGEGRLSLFNGTPRALLHPALKDPLQMNAMLSVM
EGCQLLYKIQPHPTLTPIMHLLPPNILVSGHDSIPGVAPPVDGTADALRKPRLLKSFSCV
LEGVRVALFPSVEVFESDLLQLLNRDCQNTNRGAEGRSVVVQERRLLVGVHNGWGWVEKP
QVLVLEREAVGSRAAGARGAGAGDSIRQTSMEKINDRLSLRGSVALKMMRHSAFSIVFQL
QYVFSCPMAGDGQMTSTAVHRAAFMQCVCWCVWSLFSNPEGPSDNVCLKLQSGALPNPWG
VMVYSSNTQQVNSGKCVIKFKFSSGVETSANVVSPVSPRETSPTKKLVSASQDENILVPT
ASTLQSPRGPTLSLSQLAATSRYPTMSHTVGSPWQQQLPSLLSPSLMASAHQLSHVERPG
AGSIAHLELSVQEREGERSEEEGEIQELTFNPVHAPVITLGTHAAGSSRSTSRRSLAQLF
SSGFPQILDQQNQVAEVLDPSEPVNFDPQREEADPLQANTLILQFLAFTRVPQAGVHSNW
PNSVHFTFQLYRFPPVTTERLKLLDPERSSRIDVKSPSDSPCVLYLINKDGSLSSGCPGL
QLQYRVDPLFLKPGERAWFLRYLALHSLQIDVWDSESLLLIGSAAVELKHMLRQGRAAVQ
VCHELEVITTEYQQDASFAIGHDSKHRAFPAINVYTTVKGILHLRLGNVGCRVSSSQSSL
ALPPACSHVVQPSDATQGLAGGVVPALTVLRLNASNARRARRLPETDSELARLLQSTMRE
VGGAMLHKQDESEEVRQRKMDRMAAVRQHEEQRVTPPFQDNANLTKHRAERMQHSRDLHL
IEAYRERCKAQEITNMLSQAITTKHTLYATLGTAEFFEFVLKNPLNVPQTITIECDDPEL
SVIVKSEEWRYFKELTKTRTPLEHEMFHQESTLTPQVYLRPKESLHIPFKYQSFLCGHIH
PSQDTKGLMISKSPQMAQKHLSNTIQAKSIKVQFRGEDGKPLAICQVNVEPTPHVVDQTF
RFYHPELTFLKKAIRLPAAWDSTADGSTTLHVRCSDPNVICHATNLSPGEPQDVYLKVPG
CPSPQIRKFFITIFTDLWLASPAQIWQVYVHYLQRMDLSCVCGTLSWHSLVVHGTQAIRR
VKCYTSHPLELQVDPGEVFALPAQGVQDVRVGVKALRPGSRFFYLNVLDVDTRQLVGSWL
LCITCRQPVISKAFEIKVPVDGGKGSNKKISFTNPYSTSRVFTLSTDHPDLLMFKEEQFQ
IMGGEIYTIGLRFAPTQNPGTEEILIFINDQQDKNEDTYCVRVQYR
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtggaaagaggttttcgaccgaaaccgagtgatcccacctcacagtcaaacc
gctcgacaagcccaggtatcttctcatggcctcaagctacacttcaagcagatcgatgga
cttcacgtaaaacagtcagaggagcagcatgcactcaggtgtcagctgcgtgtgaccttg
tatgactcaggtcaccagcacttctttgggcgcacgtggaagagcgggtcacattctgtc
agcggtacggcgggtcagatcggtcgagtgcccttcaatgaggttgtatacttccataca
tctttgtgcttgagctctgtggtggcagtggtagagctggtgtttctatcaaccaggcca
gatggttcccagaatgcagtggggtcagggtttgggctcctccagctcttcacaggtcat
gtggataccatcatctctcagggagagggcagattaagtttgttcaatgggactcccaga
gccctcctgcacccagcgctgaaagaccctctccagatgaatgccatgttatcagtaatg
gagggctgtcagctgttgtacaagatacagccacacccaactcttactcccatcatgcac
ctgctcccacccaatattctggtgtctggacacgacagcatccccggagtggcgccgcct
gtggatggcacagcagacgcgctgcggaagcctcgtctgttgaagagtttctcctgcgtg
ttggagggcgtccgcgttgcactcttcccctctgtggaggtctttgaatctgacctgctc
cagctgcttaacagagactgccagaatacaaacaggggtgcagagggtcgctcggttgtg
gtgcaggagcgcaggctgcttgttggggtccataatggctggggttgggtggagaagccc
caggtgttggtgcttgagcgtgaggccgtggggagcagagctgctggggcccgtggagcc
ggcgcaggtgacagcatcagacagacctccatggaaaaaatcaatgatagactgtctctt
cgtggcagtgtggcactgaaaatgatgaggcattctgctttcagcatcgtcttccagctc
caatatgttttctcttgtccaatggctggagacgggcagatgacatcaacagctgtgcac
agagcagcatttatgcagtgtgtgtgttggtgtgtttggagtctgttctcgaaccccgag
ggccccagtgataacgtgtgtctcaaattgcaaagtggtgccctcccaaacccttggggt
gtcatggtgtactcctcaaacacccagcaggtgaattcagggaaatgtgtcatcaagttc
aagttttcatctggtgtggaaacttctgccaacgtggtgtcaccagtgagccctcgggaa
acttcgccaactaagaagcttgtttctgcatcccaagacgagaacatcttggtgccaaca
gcttcgacactgcagtctccacgtggtccaactctgtctctctctcagcttgccgcgact
tcacgctacccgaccatgagccacactgtggggtctccatggcaacaacagctcccctct
cttctctctccctccctgatggcatcggcccaccagctgtcacatgtcgagcggccaggt
gctggcagcatagcgcacttggagctgagtgtgcaggagagagagggagagagaagtgag
gaagagggcgagatacaggagctgaccttcaacccagtgcacgcccctgtcatcaccctc
ggtacacacgctgcaggctcctccaggtcgacctctcgcagatctctggcccagctcttc
tcctctggttttcctcagatcttggatcagcaaaaccaggtggccgaggttctggatcca
tctgagcctgtgaactttgaccctcagagagaagaagcagatcctcttcaggccaatact
ctaatcctgcagttcctggcctttaccagggtccctcaagctggtgtgcattcaaactgg
ccgaattctgtgcattttaccttccagctttaccgtttcccccctgttacaacagagcga
ctgaagctgcttgacccagaaaggagcagtaggatcgatgtgaaatccccatctgattcc
ccttgtgtactctaccttatcaacaaggatggctcattaagctctggttgtccaggtctg
cagctgcagtacagagttgacccactattcctaaagccgggtgagcgggcatggttcctg
cgatacctggctctacattccctgcagattgatgtgtgggacagtgaatcattactccta
attggctcagctgctgtggagctgaagcatatgctgcggcagggccgtgccgccgtccag
gtgtgccatgagctggaagtgattaccactgagtaccaacaggatgccagctttgccatt
gggcatgacagcaagcacagggcatttccagccatcaatgtctacaccactgtgaaagga
attctgcatctgcggcttggcaacgtcggttgtcgtgtatcaagttcccagagttccttg
gctcttcctccagcatgttctcatgtggtccagcccagtgacgccactcagggcttagca
ggaggagttgtcccggctttaacagtcctcaggcttaacgcgagcaatgccagacgagcc
cgccgcttgccagaaaccgacagcgagctggccagactgctccaaagcaccatgagggaa
gtgggcggggccatgctccataagcaggacgaatctgaggaagtgcgccagaggaagatg
gatagaatggcggctgtccgtcaacacgaggaacagagggtcacgccaccttttcaggac
aatgcaaacctcacgaagcacagagccgaacgcatgcagcattctcgtgacctgcacttg
attgaagcctatcgtgagcgctgtaaagcacaggagatcacaaacatgctctcccaagcc
attaccaccaaacacactctttacgccactctcggaacagctgagttcttcgaatttgtg
cttaagaatccattgaacgttcctcagacgatcaccattgagtgtgatgatccagaacta
agtgtcatcgtgaaaagtgaggagtggagatattttaaggagttgacaaaaacacggaca
cctctggagcatgagatgtttcaccaggagagcacactgactccacaggtttacttgcgg
cccaaagaaagcctccatatccctttcaagtaccagagtttcctttgtggccacatccat
ccttcacaggatacaaaaggcttaatgatttcaaaaagtccacagatggctcagaaacat
ctgtccaacaccattcaagccaaatccatcaaggttcagttccgtggggaggatggaaag
cctctggcgatctgccaggtgaatgttgaaccgacaccacatgtggtagaccagaccttt
cgtttctaccatcctgaactcaccttcctaaagaaagccattcgcctgcctgcagcctgg
gacagcacagcagatggctccaccaccctccatgtgcgctgcagcgaccccaatgtcatc
tgccacgctaccaacttgtctccgggagaaccgcaagacgtgtatctgaaagttcctggt
tgtccaagtccacaaattaggaagttcttcatcactatattcactgacctttggctggcc
tcgcctgcgcagatatggcaggtatacgtgcattacctgcaaaggatggacctgagctgt
gtgtgtggcactctcagttggcattcgctggttgtgcatggcacacaagccattcggagg
gtcaagtgctacacgtcgcatcccctggagcttcaggtggatccaggggaggtttttgct
ctgcctgcgcaaggagtgcaggatgtccgggtgggcgtaaaggccttgcgccccgggagc
cgtttcttttacctcaacgtgcttgacgtggatacgcggcaacttgtcggctcctggctg
ctttgtatcacgtgcaggcagcctgtgatctccaaggcatttgaaatcaaagtccctgta
gatggtggaaagggcagcaataagaaaatcagtttcacaaacccctactctacctccaga
gtattcacactgagcacagaccacccggaccttcttatgtttaaagaggaacaatttcag
atcatgggaggggagatctacaccatcggtctacgctttgctccaactcagaaccccggt
acagaggagattctcatcttcatcaacgaccaacaggataagaatgaggacacttactgt
gttcgagtccagtacagataa
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