KEGG   Paramisgurnus dabryanus (large-scale loach): 135729472
Entry
135729472         CDS       T10799                                 
Symbol
kdm5bb
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pdab01009]
    135729472 (kdm5bb)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pdab03036]
    135729472 (kdm5bb)
Enzymes [BR:pdab01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     135729472 (kdm5bb)
Protein phosphatases and associated proteins [BR:pdab01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     135729472 (kdm5bb)
Chromosome and associated proteins [BR:pdab03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    135729472 (kdm5bb)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHDvar_NSD zf-PHD-like
Other DBs
NCBI-GeneID: 135729472
NCBI-ProteinID: XP_065103232
LinkDB
Position
11:complement(16821885..16843266)
AA seq 1524 aa
MTQPGPAEFTPPPECPVFEPSWEEFADPFAFINKIRPIAEKTGICKVRPPPDWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYQLNRLV
AEEGGFDIVCRERRWTKIAMTLGFAPGKAVGSHLRSHYERILYPYNLFQSGANLLAPEFA
AKLASFGLPPGLMECVQKPSLDDVDSKDKEYKPHDLLQRQNVHMPSTDTSAPARRAKRMK
TESPCIKQEGGEECDNRPNLRRRMGSFVAKPEPEREIQIQVKQEPVEIKEIIPEPEKTKS
RFKKNNPPPPVSVVDLYVCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGDWRC
PKCLAQECSKPQEAFGFEQAHRDYSLKAFGEMADSFKSDYFNMPVHMVPTELVEKEFWRL
VGTIEEDVTVEYGADIASKEFGSGFPIKGGKFKVAPHDEKYLKCGWNLNNMAMMTPSVLT
HVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEEV
MKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQG
FNFAEAVNFCTVDWMTLGRQCVDHYRLLNRYCVFSHDEMVCNMAMKADSLDVVLASAVQK
DMHLMIKEERELRDKVRKLGVAHCQLFQYDLLADDERQCIKCRTTCYLSALTCPCRPGIQ
VCLHHAHNLCSCPISNYTLNYRFTLDDLFPMMNAVRQRAESYDEWASRATEIMEAKLDKK
RNVTVFRALLEESNENSFPDNDLLRQLRLVTQDAEKCSSVAQQLLNGKRQTRYRSGGGKS
LNQLTVEELRSFVRQLYNLPCSLTQAPLLKELLNSIEDFQQHSEKLLSDEVSADAVSEIE
SLLEEGSQFDVLLPELPLLRERLEQARWLAGVQQAEDLVTNPCGLSLDNMRRLIDRGVGL
TPHESIERTMARLQELLTISEELEEKAQVLLKARPPVSLEMLCSQLTQMEGVSAYLPNCL
LLQDTVNRAKEWLQEAENLQVGGQIPVLSALADMILRAHAIPVLLEPLEKLETLVSEVHS
WKESAAKTFLIKNSPFTLLEVLCPRWEVSSSVKKKRKVKADCTSSGKKKLVKLDSMSDVE
RALADSKDSASAMFTLAEVRLKELESLCSLRAANESKLLPTADCAALKVCVCQQPAMGAM
LQCELCRDAFHSVCVREPTEPRGTEAWLCPLCLRSTRPPLDKITSLLSSLQRIRVRLPEG
DALRYMIERAVSWQRRAREVINSYNFSLTSQERRGSSPTHSLHRTTGHSRKQLSGSPSWC
QDWNVSEQDQAVFYTEQRCIPLQGLSAEVEELMVEGLLLQVSLPETQQLYRLLLSGPPTT
NTPHTEHTPYLTQKHSSPQRERDAITSAEKKAKRRMNREETEISERGMKPKSKKQRMGSE
KRRERKAASVSASDVSQSEDSGEDMTLCPAENCLQPEGEEVNWVQCDCCNRWFHMICVGV
SAELAAEEDYMCVTCSTTNTGRRK
NT seq 4575 nt   +upstreamnt  +downstreamnt
atgacccagccgggcccggccgagtttacccctccaccggagtgcccggtgttcgagccc
agttgggaggaatttgcagatccgttcgcgtttattaataaaatccgacccatcgccgag
aaaaccgggatctgcaaggttcgaccgccgccggattggcaacctccgtttgcatgcgac
gttgacagacttcattttactcctcgaatccagcgactcaacgagctagaggctcaaact
agagttaagctcaactttttggaccagattgcaaaattttgggagctacaaggatgcacg
cttaaaattccacacgtggagaggaaaatccttgatctgtatcagctcaacagactggtt
gcagaagagggaggttttgatattgtttgcagagagagaagatggacaaagatcgccatg
acgttgggtttcgccccagggaaagctgtggggtcacacctgcgatcccattacgaacgg
atcttgtacccatacaaccttttccagtctggggcaaatctgctggctcctgagtttgca
gccaaactggcaagttttgggttgcctcctgggctgatggagtgtgtgcagaaaccatca
ctggatgatgttgatagcaaagataaagagtacaaacctcatgacttgctacagaggcaa
aacgttcacatgccatccactgacacaagcgcacctgctagaagagctaagagaatgaaa
acagagtctccttgtattaagcaagagggaggtgaggagtgtgacaacagacccaacctt
agaaggaggatgggttcctttgttgccaaacctgaaccggaaagggagatccagatacag
gtgaagcaggaaccagtagagataaaagagatcattcctgaaccagagaaaaccaaatca
cgcttcaagaaaaacaacccacctcctccagtcagcgtagtggacctgtatgtgtgtttg
gtgtgtggaaaggggaacgatgaagataggttattgctatgcgatggttgtgatgacagc
taccacaccttctgcttaatcccgcccctcaccgatgttcctaaaggtgattggaggtgc
cctaaatgtttggctcaggagtgcagtaaacctcaggaggcatttgggttcgagcaagca
cacagggactattctctaaaagcgtttggggaaatggctgactccttcaagtcggactat
ttcaacatgcctgttcatatggtacccactgagctggttgaaaaagagttttggcgattg
gtcggcaccattgaagaggatgtgacagtggaatatggcgctgacattgcctcgaaagaa
ttcggaagcggttttccaatcaagggtggaaagtttaaggttgcaccgcatgatgagaaa
taccttaaatgtgggtggaacctgaataacatggccatgatgacaccatcagtgctgacc
cacgtcaccgcagatatctgtggtatgaccctgccatggctctatgtcggcatgtgcttc
tcctctttctgctggcacatcgaggaccactggagctattccatcaactacctgcattgg
ggtgaacctaagacctggtatggtgctcctggttttgctgctgagcagttagaagaagtg
atgaagaaacttgccccagaactgtttgaatctcagccagacctcctacaccagcttgtt
acaatcatgaaccctaatacactcatggcccacggagtcccaatttacagaaccaatcag
tgcgcaggagagtttgtcatcactttcccaagatcctatcacagcggcttcaaccagggt
tttaacttcgcagaagctgtgaacttttgcacagttgactggatgacactgggccgtcag
tgtgtggatcactaccgtctgctaaaccgatactgtgtgttctctcatgatgagatggtg
tgtaatatggccatgaaggccgacagcttggacgtggttctggcgtcagctgtgcagaag
gacatgcacctcatgatcaaagaggagagagagctgcgcgacaaagtccggaagctgggc
gtggcccactgtcagttgttccagtatgacttgctggcagatgatgagagacagtgcata
aagtgccgcaccacctgttacctgtcagctctcacctgcccctgcagaccaggaatccag
gtgtgtctgcaccatgcccacaatctctgctcctgcccaatctccaactacacactcaat
taccgttttacactggacgacctcttccccatgatgaatgctgtgaggcagagggcagag
tcttatgatgagtgggcatcaagagcgacagagatcatggaggccaaactagacaagaaa
cgcaatgtcacagtgtttcgtgcccttctagaggagtcaaatgagaactcatttccagac
aacgatctgttacgtcagctcaggctggtcacacaagatgctgagaaatgttcatctgtt
gcccagcaactgctaaatggcaagaggcagactaggtaccgctcaggtggaggaaaatct
cttaatcagctcaccgtagaggaactgaggtcgtttgtccgccagctttataatcttccc
tgcagcctgacgcaggcaccgcttttgaaggagctgctgaacagcattgaagatttccag
cagcacagcgagaagcttctgtctgatgaagtaagcgcagatgccgtcagcgagatcgag
tcgttgctggaggagggctctcagtttgacgtgctacttccagagctgccattgctacgg
gagcgtttggagcaggcgcgctggttggccggggttcagcaggcggaagatctggtgacg
aacccgtgcggcctctctctggacaacatgcgtcgactgatcgacagaggggtcggactg
acgccacatgagtccattgaacgtacgatggctcgcctgcaggaactgcttacgatctca
gaggagctggaggagaaagcacaagtgctgcttaaagccaggcctccagtgagtttagaa
atgctctgttcacagctgactcagatggagggggtatctgcatacctgccaaactgcctc
ctactgcaggatacagtcaacagggctaaagaatggcttcaggaagctgagaatttacag
gtgggaggtcagattccggttctcagcgcgctggctgatatgattttgagagctcatgcc
atcccagtactactggagcctctggagaaactggagactctggtctcagaggtgcacagc
tggaaggagtcagcagccaaaaccttcctcatcaaaaactcccccttcactttacttgag
gttttgtgtccacgatgggaagtgagcagctctgttaagaagaagaggaaggtgaaggct
gactgcacatcttcagggaagaagaagcttgtgaagctggacagcatgagtgatgtggag
agagcacttgcagatagcaaagactcggcctctgctatgttcactctggctgaagtccgt
ttaaaggagctggagtcactttgctctcttcgtgcagctaacgaatcaaagctcctacct
actgcagactgcgctgctctcaaagtgtgtgtgtgtcagcagcctgccatgggtgcgatg
ctacagtgtgagctgtgccgagatgcatttcacagcgtgtgcgtgcgtgagcccaccgaa
ccccgcggcacagaagcgtggctgtgtccgttatgtctgcggtcgactaggccccccctg
gacaagatcacgtcccttttgtcatccctgcagcgaatccgcgtccgtctcccagagggt
gacgcgctacgttacatgatcgaacgagccgttagttggcagcgacgagcgcgagaggtc
atcaattcttataacttctccctaacctctcaggagcgcagagggtcctcacctacacac
agtttacatcggaccactgggcacagtaggaagcagctgagtggatctccatcctggtgt
caggactggaatgtttccgaacaggaccaggctgtgttttatacagagcaacgctgtata
ccactgcagggtcttagcgcagaggtagaggagctcatggtggagggtttacttctgcag
gtttctctacccgaaacccaacagctctacagacttttgctatccggccccccgaccaca
aacactccccacacagaacacacaccctacctcacgcagaaacactcctcaccgcaaaga
gagagagatgcaatcacttcagcagagaagaaagccaagcgacggatgaacagagaggag
acagagatcagtgaaagagggatgaagccgaaaagcaagaagcagcgtatgggctcagaa
aaaagaagggagaggaaggcagcgtcggtctcagcgtcagatgtttctcaatcagaagac
tcgggagaagatatgaccctgtgtccagcagaaaattgtcttcagccagaaggagaagag
gtgaactgggtgcagtgtgactgctgtaatcgctggtttcatatgatatgtgttggggta
tcggcagaactggcagctgaggaagattacatgtgtgtgacgtgcagcacaacaaacacg
ggtcggcggaagtga

DBGET integrated database retrieval system