Paramisgurnus dabryanus (large-scale loach): 135733520
Help
Entry
135733520 CDS
T10799
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04510
Focal adhesion
pdab04512
ECM-receptor interaction
pdab04514
Cell adhesion molecule (CAM) interaction
pdab04517
IgSF CAM signaling
pdab04518
Integrin signaling
pdab04672
Intestinal immune network for IgA production
pdab04810
Regulation of actin cytoskeleton
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135733520 (itga4)
04514 Cell adhesion molecule (CAM) interaction
135733520 (itga4)
04517 IgSF CAM signaling
135733520 (itga4)
04518 Integrin signaling
135733520 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135733520 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135733520 (itga4)
04810 Regulation of actin cytoskeleton
135733520 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
135733520 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdab04147
]
135733520 (itga4)
04515 Cell adhesion molecules [BR:
pdab04515
]
135733520 (itga4)
04090 CD molecules [BR:
pdab04090
]
135733520 (itga4)
Exosome [BR:
pdab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135733520 (itga4)
Exosomal proteins of other cancer cells
135733520 (itga4)
Cell adhesion molecules [BR:
pdab04515
]
Integrins
Integrin alpha subunits
135733520 (itga4)
CD molecules [BR:
pdab04090
]
Proteins
135733520 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
135733520
NCBI-ProteinID:
XP_065108297
LinkDB
All DBs
Position
15:complement(6544201..6585029)
Genome browser
AA seq
1020 aa
AA seq
DB search
MACKMTLFNLNADLIWRYAAGILWYLLILCDCYNLDVEHPLVFNGPSGSFFGYSVLLHEH
DENTWLIAGAPVANSSFYPNTQSPGAVYNCSMMSLQCEQLPVGGVQNCGRHCLAENDNQW
LGVSLSRQPSKGHVMACGHRWKNVFYSKKDNQNKLPHGVCFTFSPDLKQATHKTPCYKDH
QRKFGEGYGSCQAGIANLFTEDLMIMGAPGTWYWTGSVLVYNTTSSNLAAYVDDDSEVLY
GSYLGYAVGAGHFLYPQSTEIVGGAPQHEQTGKAYIFRIEGNTLKIVNETKGKQLGSYYG
ASVCAVDLNADGLSDLLVGAPMFSSVREEGRVHVYINQGEANMKEADFELVGSDSYAARF
GETIVNLGDIDDDGYPDVAIGAPQEDDLRGAIYIYNGRSSGIAQSFSQRISGSLLGNNLK
MFGQSVSGGVDIDGNNYPDVAVGAFLSDSAVVFRTRPVVKVDAVMLLPESVNRSVAQCFE
SSLPAVCVNIMVCFRVGGKQIPGNIEIKYNLTADVHHKETLPSRFYFSGNKTSNVMTGRV
KVKHEKHTCTTHQAFMKKDVRDIFTPIHFEVKYDLGGHSVVQQDPMGLPALKPILQQKEK
SSVVKNQTVFARYCAWENCSANLQVSAHLVLPQSFGNMHYFALGTGKSLMLKTLLINTGD
DAYLPKLHLRFPSNLHFIKVLEEDKYVSCELAEENKMAVGLDCNVGNLYIPPFAKLGITF
LMDIMQNSSAGDLNITINAMSESFENPDLLRDNVAIVSLPLRYAVDVNVHGFVSPTSFVI
GDQEYVPVDCYSKKFNYTYKVMNMGPSKAVDAKVKIATPLMLVPYKHQLIRIANLQTTLG
YCFQTNDTVEIIDDCDVPKASFLKELAFFFSPKSKRTMFCGFEDKICRAVECHFGDLEVG
MEVSITMEVELNPRVLQQSPGRHYVMMIQSLIHFISPAKEANTILLKDDISARVILEGLY
NQKPAASVGIFLIVSSLILGLIILAMLVIPLWKLGFFKRKLKEDIKRDSWDYVPKNESVY
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtaagatgactttatttaatctaaacgcggatctgatttggagatatgcagct
gggattttgtggtacctgttgattctgtgtgattgctataatttggacgtggagcatcct
ttagtttttaatggacctagtggatctttctttggatactcggttctgcttcacgagcat
gatgagaacacatggctgatagctggagcgcctgtggcaaactccagcttttatccaaat
acccaaagtcctggagcggtctacaattgcagtatgatgagcttacaatgtgaacaactc
cctgtcggaggtgtacagaattgtggaaggcattgtttggctgagaacgataaccagtgg
ctgggtgtgagtctgtcccggcaaccctcaaaaggccatgtgatggcttgtggacatcgg
tggaagaacgtcttctattcgaagaaagacaatcaaaacaagcttccacatggtgtttgc
ttcacattcagcccagatttgaaacaggccactcataagaccccctgctataaagatcat
cagaggaagtttggtgaaggttacgggtcatgccaagctggcatagcaaacctgttcaca
gaggacctgatgattatgggagcccccggtacctggtattggaccggatccgtgcttgtc
tataacaccacaagcagcaatttggcagcttatgttgatgatgacagcgaggttctttat
ggcagttacttaggttatgctgttggtgccggacactttctgtacccccagagtactgag
atagttgggggagctcctcagcatgaacagactggtaaagcttacatattcaggattgag
ggcaacacgttgaaaattgtcaacgaaaccaaaggcaaacagctgggctcttattatggc
gcaagtgtatgtgctgttgatctgaatgcagatggcctgtctgatctgctggtaggagct
cctatgtttagttctgtgagggaggagggacgcgtacatgtttacattaaccagggagag
gctaatatgaaagaggcagattttgagttagtcggcagcgactcttatgcagctcgattt
ggagaaaccatcgtcaatcttggagatatcgatgatgatggatatccagatgtggccatc
ggagcccctcaggaggacgacttgcgtggtgctatatatatctacaatggaaggagcagc
ggtattgcacagagtttttctcaaagaataagtggctctttgttaggaaacaatctcaag
atgtttggccagtctgtgtctggaggagttgatattgatggcaacaattacccagatgtt
gcagtgggagcttttctctcagattcagctgtggtgttcaggacacgtccagtggtgaag
gtggatgccgtgatgttactgcctgaaagtgtaaaccgttctgtagctcaatgctttgaa
agcagcctgcctgctgtttgtgtcaatatcatggtgtgctttcgagttggaggaaaacaa
attcctggaaatatagagatcaagtacaacctaaccgcagatgttcaccacaaagagacc
ttaccctctcgattttatttcagtggaaacaagacatcaaatgttatgacgggcagagtc
aaggtcaagcacgaaaagcacacctgtaccacccatcaggccttcatgaagaaagatgtc
cgcgatatcttcacgcccattcatttcgaggttaagtatgaccttggagggcacagtgtg
gtacagcaggacccaatgggcttaccggctctcaaacccattctacaacagaaggaaaag
tcaagtgtggtgaaaaaccagaccgtgtttgccagatattgtgcctgggaaaattgctca
gccaacctgcaggtttccgctcatttggttttaccgcagtcttttggaaatatgcattat
tttgctttgggtactggaaagagcctcatgttaaagacactgttgatcaacactggagat
gatgcatatcttcccaaacttcacctgaggtttcccagcaacctgcacttcatcaaagtg
ctcgaagaggataaatatgttagctgtgaattagcagaggaaaataaaatggctgtgggt
ttggactgcaacgttgggaatttatatatccctcctttcgcaaagcttggcatcaccttt
cttatggacataatgcagaacagcagcgccggagatcttaacattaccattaatgctatg
agcgagagctttgaaaaccctgatcttctgcgtgacaatgtggccattgtctcgttgcct
ttgagatacgccgttgatgtcaatgtccatgggtttgtctctccaacttcatttgtaatt
ggagaccaagagtatgtgccagtcgactgctattccaaaaagttcaattatacgtacaag
gtgatgaatatgggtccgagcaaagctgttgatgccaaagttaagattgccacgcctcta
atgcttgtgccctacaaacaccaattaatcaggatcgctaatttacagacaacccttggt
tattgcttccagacgaacgatacagttgagataattgatgactgtgacgtccccaaagca
tcttttttaaaggaactagcgttctttttctccccaaaaagcaaacgcacaatgttttgt
ggttttgaagataagatctgtagagcagtggagtgtcactttggagatctggaggttgga
atggaagttagcatcactatggaggtcgagttgaaccccagagtcctccaacagagtcca
ggaaggcactacgtaatgatgatccaaagcttgattcactttatttcaccagcgaaagaa
gccaacaccatacttttaaaagatgatatttctgctagagtaattttagaaggtctttat
aatcagaagcctgcagcgtctgtgggcattttcctgattgtgtccagtttgattcttgga
ctgattattttagccatgcttgtcattccgctctggaagcttggattctttaagcggaag
ctgaaggaggatattaaacgagacagttgggactacgttcctaagaacgagagcgtgtac
taa
DBGET
integrated database retrieval system
