Paramisgurnus dabryanus (large-scale loach): 135735947
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Entry
135735947 CDS
T10799
Symbol
rapgef2a
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04010
MAPK signaling pathway
pdab04517
IgSF CAM signaling
pdab04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135735947 (rapgef2a)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135735947 (rapgef2a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135735947 (rapgef2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
135735947
NCBI-ProteinID:
XP_065110715
LinkDB
All DBs
Position
4:complement(41728231..41771742)
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AA seq
1488 aa
AA seq
DB search
MHADGMASYVDNSFRHAIMKNPADRTQQDLQVVYSYLHGMEALSNLREHQLRLMCETVRY
EQHEANEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEAS
EMIVVDYMDDNDEYFQRQASHRQSRRRFRKINQRGERQTIIDTVDHYPMSKPPLPPGYHS
ECSKSQLPADFSKLHPSDSCHSHMTTSQSRSSIASDSGSSSLSDIYQATESDCGDMDLSG
LPETAVDSDEDDDDEDVGRGTDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFVQQLPAFA
SLSVSVRRELCAVMVFAVVERAGTVVLNHGEELDSWSVILNGAVEVIHPDGRGESVCMGG
SFGVSPSMEKQLMTGVMRTKLDDCQFVCIAQQDYCCILNQVEQNTQRVEEEGEIVMVKEH
RELDRTGTRKGHIVVKGTAERLMQHLVEDHSVVDPTYIEDFLLTYRTFLPSPLILGQRLL
DWFNDPCLRDKVTRVVLLWVNNHFSDFEGDPDMTNFLEEFQNNLEREKMTGQLRLLNIAC
AAKAKPRVITITRASRETPLPFTLIGGAERGTHLFISSVEVGSKAEEAGLKRGDQILEVN
GQTFENVQLSKATEILRNNIQLCMSVKTNLLVFKELVARVAEEIKNGVPHLPKIGDGKKN
SRFSVPDLGAGTDVIGQDKVSKKAKAHTMGGRIKLMKILDKTRMSILPQKPYSSDLGLGQ
TQDDSIVGLRQNKLAPPTIAGSGNLSSSNPDLAQGQQRIIDYSTQPPAPGFTQLQEQVLR
VFKADQQSRYLLINRDTTAREAANQAIREFGLTTSSEAYSLCEVSVTQEGVIKQRRLPDQ
LSKLADRIQLSARYYLKNNMETETLCSDVEAQEMQRESQVSLLSLSSVEIANQLSARNYL
LFSSIEPTDYIIDLFKLRPHDPPSNLRNFEGLVNQETFWVATEVVQESNPAKRMKIIKHF
IKIALHCRDCKNFNSMFAIISGFNLPPVSRLRSTWERLPGKYEKLLEELQDVFDPSRNMA
KYRNLLNKHNLQPPVIPLFPVIKKDLTFLHEGNNSKVDGLVNFEKLRMIAREIRHVFRMA
SITMDPALLFKTRKKKWRSLGSLSQVSSSSLSDIGTMGGKRKGRRSSFLSTKKLYEVEMM
SRRVRQYLDSHSLESNEDKLHELSILCEPPNSATLKSSGDRRRADASPVSQRSSTPQHIN
GNPGRKKSIDKDMLPFEERQRKLTEGSQSDASSLVSSPRTSPRNTPRKAPQLVVSDASDQ
LSLLSSSSSDFIINDDHTHAQAHTLTHPLNTRRAEPDQISLGSYSLTQDLCDRASLDAAD
SGRGSWTSCSSGSHDNIQSIPHRIGYYDNRSSWETLSEGIGRSHTSTPTGCWGEELEGDT
GTIKRRGGKDETPNTPSVASRREGRFREPPPTPPGYTALSLAETDSPQVHAHGRRPPDYN
AALQRSRFVKRSCEHPSQVRPTSRLPAYSHCQSPRRPQQDENEQISAV
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcggacggaatggcgtcttatgtggacaatagttttcgacacgcgatcatgaaa
aatcctgccgacaggacgcaacaggatctgcaggttgtgtattcatacctccatggaatg
gaagcattgtccaatctgagagagcaccagctcaggttaatgtgtgagacggttcgatat
gaacagcatgaagccaatgaagtgttatactatcctgatgacattgggacctgctggtac
atcttgctgtctggttcagtctttattaaggaatccatgtttttgccacgcagcagtttt
ggtaagcgttctgcgggtagtttgcgtcgtggttgtgagtgtatcgtccttgaagcttca
gagatgattgtggtggactacatggacgacaatgacgagtatttccaaaggcaagcgtct
catcggcagtccaggagaaggttcagaaagataaaccagcgtggagagcgacagactata
atcgatacagtcgatcattatccaatgagcaaacctcctctgcctccaggataccattcg
gaatgctcaaaatcccagcttcctgcagatttctcaaagcttcacccctccgacagttgc
cactctcacatgacaacaagccaatcgcgttccagcatcgctagcgattcaggaagtagc
agcctttcagatatttaccaggccactgagagcgactgtggcgacatggatctgagcgga
ctccctgaaacggcagtggactcggatgaagacgatgatgatgaagatgtgggcaggggg
acggaccctctcatgagtcgggatattgtgcgagactgtctggagaaggatcctatggat
cgtacagacgatgacatcgagcaattgctggagtttgtacagcagctcccggcattcgcc
agcctgagcgtttctgttcgaagggagctctgtgccgtcatggtgttcgcggtcgtggaa
cgggccggaaccgtggtgctgaatcatggtgaagagctggactcttggtcagtcattctg
aatggagctgtagaggtgatccatccagatggccgcggtgaaagtgtgtgcatgggtgga
agttttggtgtttcaccctctatggagaaacaactgatgactggagtcatgaggaccaag
ttggacgactgtcagtttgtgtgcatcgcacagcaggactactgctgcattctgaatcag
gttgagcagaacacacagcgtgtagaggaggaaggggaaatcgtcatggtgaaagagcac
agagagctcgaccggacgggtacccgaaagggacacattgttgtcaagggtactgctgag
aggttaatgcagcacttagtggaggatcattcagtcgtggaccccacatacatcgaagac
ttcctgttgacctatcgtactttcttgcccagtcctctgattctaggacagagacttctg
gactggtttaatgacccctgtttacgagacaaggtaacacgagttgtgctgttatgggtt
aacaatcactttagtgatttcgaaggagaccccgatatgaccaatttcctggaggagttc
caaaacaatctggaaagagagaaaatgactgggcagctgcggttgctcaacatagcttgt
gctgctaaagccaaacccagggtgattacaataacaagggcttctcgggaaacgcccctc
ccctttacgcttattggaggagccgaacgagggacacacctattcattagcagtgtggag
gtgggaagcaaagcagaggaggcggggcttaagcgtggagaccagatattggaggtgaac
gggcaaacctttgagaacgtacaattgtccaaagcaactgaaattctaaggaacaacatc
cagctgtgtatgagcgtcaaaaccaacctcctggtcttcaaggaacttgtggccagggtg
gcagaggaaataaaaaacggcgttccccatcttccaaagatcggtgatggaaagaaaaat
agccgtttctctgtacctgatcttggagctggcactgatgtcataggtcaagataaagtc
agcaaaaaggccaaagcacacactatgggcggccgaataaaactgatgaagattctagac
aagacgcgcatgagtatcctacctcagaaaccttacagcagtgacctcgggttgggccag
acccaggatgacagcattgtgggattgcgacagaacaaactggccccgcccaccatagcg
ggcagtggaaatctctcatccagtaaccctgacctggcccagggccagcagcgcattatc
gactacagtacacagccaccagctcctggattcactcaattgcaagagcaggtgctgcgt
gttttcaaggcagaccaacaaagtcgttacttgctgatcaatagggacaccacagctaga
gaggcagccaatcaggccatacgagagtttggtttgacaacatcatccgaagcctattcg
ctctgtgaggtgtcagtcacgcaggagggcgtcatcaaacagagacgacttcctgatcaa
ctctccaaactagccgataggatacagctcagtgccaggtactatctaaagaacaacatg
gagacggagacgctctgttcagatgtggaagctcaggagatgcagcgagaatctcaggtc
tctctgttatctttgagctcagttgagatagccaatcagctgtcagcgcgcaactatctt
ctcttctcgagcatcgaaccaaccgattacatcattgacctctttaagctccgcccacac
gatcctcccagcaaccttcgcaacttcgaaggtcttgtgaaccaagagaccttctgggtc
gccacagaggtcgtacaggaaagcaatccggccaaaagaatgaagatcatcaagcacttt
ataaagatcgcccttcactgccgtgactgcaagaacttcaactccatgttcgccatcatc
agcgggtttaatctgccacccgtctctcgattgcggtccacatgggaacgcttgcctgga
aaatacgagaaacttttggaagaacttcaggatgtgttcgacccgtcgcgcaacatggcc
aaataccgcaaccttctcaacaagcacaacctccagccgcccgtcattcctctgtttcct
gtcatcaaaaaagacctcaccttccttcacgagggcaacaactctaaggtggatggtctg
gtgaattttgagaaattgaggatgatcgcccgagagatcaggcatgtgtttcgaatggcc
tccatcacaatggaccctgcattgctttttaaaaccaggaagaaaaagtggaggagtcta
ggatctctgagtcaggtgagcagctcatctctgtctgacatcggaacgatgggcgggaaa
aggaagggtaggcggagttctttcctcagcactaagaaactctatgaggtggagatgatg
agcagacgcgtgcggcagtatttagactcgcactctctcgagagcaacgaggacaagctt
catgagctctctatactgtgtgaaccacccaacagcgcgacactgaagagctcaggtgac
aggagaagagcggatgcatcacctgtcagtcagagaagctccactcctcagcacataaat
ggaaatcctggccgcaagaaatcaatcgacaaagacatgctgccattcgaagagagacaa
cgaaagctcacggagggcagccaatcagatgcctcgtctctggtttcctctccgcgtacc
tcacctcgtaatacacctagaaaagccccacagttggtggtgagcgatgcatcagatcag
ttgagtttgttaagctcctcctcctctgatttcatcataaatgacgaccacacccatgct
caagcccatacgctgacacacccactcaacacgcgtagggcggaacctgaccaaataagc
cttgggtcctactccctgactcaggatctgtgcgaccgggcatcattggatgcagcagac
agcgggcgtggcagctggacgtcctgctctagcggttcccatgacaatatccagagtatc
ccacatcgtatcggttattatgacaatcgcagcagctgggagacactgtctgaagggatt
ggacgtagtcatacgagcactcctaccggatgctggggcgaagaattggaaggcgacaca
ggaacgataaaacgtagaggtggaaaagatgagactccaaatacgccaagtgtcgcgagt
cgaagggaagggcgttttagagagccaccacccactccaccgggttacacagctctttca
ttggctgagacagacagtcctcaagttcatgctcatgggagacggccaccggactacaac
gcagcgctgcaaaggtcccgatttgtaaaaagatcatgtgaacatccttcacaagtacgc
ccaacaagcagattaccagcatacagccattgccagtcaccacgacgaccacaacaagat
gaaaacgagcaaatatctgctgtttga
DBGET
integrated database retrieval system
