Paramisgurnus dabryanus (large-scale loach): 135740999
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Entry
135740999 CDS
T10799
Symbol
capn1b
Name
(RefSeq) calpain-1 catalytic subunit b isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04141
Protein processing in endoplasmic reticulum
pdab04210
Apoptosis
pdab04217
Necroptosis
pdab04218
Cellular senescence
pdab04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135740999 (capn1b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
135740999 (capn1b)
04217 Necroptosis
135740999 (capn1b)
04218 Cellular senescence
135740999 (capn1b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135740999 (capn1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdab01002
]
135740999 (capn1b)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
135740999 (capn1b)
Peptidases and inhibitors [BR:
pdab01002
]
Cysteine peptidases
Family C2: calpain family
135740999 (capn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
DUF6171
Motif
Other DBs
NCBI-GeneID:
135740999
NCBI-ProteinID:
XP_065115673
LinkDB
All DBs
Position
24:complement(24904453..24924785)
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AA seq
709 aa
AA seq
DB search
MVGYSMYSFGGVSSRIQKERLLAEGMGTNEKALKFLNQDYDELKRECVESGKMFEDPCFP
AIAQSLGFKELAPNSSKTRGVKWMRPNELSNNPQFIVGGATRTDICQGALGDCWLLAAIA
SLTLNDRLLHRVVPHGQNFTDDYAGIFHFQFWQFGEWMDVVIDDRLPTKEGKLLFVHSAE
GNEFWSALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEMYELRSAPKDLHRIIGKAL
ERGSLLGCSIDITNALDMEAVTFKKLVKGHAYSVTGLREVNYRGNKERLIRIRNPWGQVE
WTGAWSDNSSEWNGIDSADREEMNNHMEDGEFWMSFQEFKRQFSRLEICNLTADALSEDA
QSFWNTIKFTGSWRKGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEVACSFLVALM
QKDRRRYRKQGQDMHTIGFALYKVPEEYQGAQSVHLKKEFFLRQSSCGRSQSFINLREVS
ARLKLPPGEYLIVPSTFEPSKEADFVLRVFTEKATETQEMDDEISFNLEDEEEISEADID
ESFKRMFAQLSGEDMEISVHELQTILNRVVCKHGDLKTDGFGMESCRCMVNLMDKDGSAR
LGLVEFQILWNKVRKWLGIYRQFDLDKSGTMSSYEMRLALEAAGFKLNNKLHQMLVARYS
EGEMIDFDNFVCCLVKLEAMFKAFKELDREGTGVAQLNVCEWLYMTMCG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggtgggctacagcatgtattcgtttggcggggtgtcgtcgcgtattcagaaggagcgt
ctgctggcagaagggatgggtaccaatgagaaagcactcaagttcctgaaccaagattat
gatgaactgaagagagaatgtgtggagagtgggaaaatgtttgaagacccctgtttcccc
gccatagcccagtcattgggatttaaagagcttgccccaaactcctccaaaacacgcggt
gtgaagtggatgaggcccaatgagctgtcaaacaaccctcagtttattgtgggcggggcc
acacggacagatatttgccagggggctttaggtgactgttggctactggctgccatagca
tccctgaccctaaatgacaggctgctacaccgggttgtacctcacgggcaaaactttaca
gatgactacgcaggcatctttcacttccagttctggcagtttggcgaatggatggacgtt
gtgatcgatgaccgcttgcctacaaaggaaggaaagctgctgtttgttcactcggcagag
ggaaacgaattctggagcgccctactggagaaggcttatgcaaagctgaacggttcgtac
gaagctctgtccggcggttccaccacggaaggcttcgaggacttcacgggcggagttgcc
gagatgtacgagctgcgtagtgctcccaaagatttgcaccgcatcatcggcaaagctttg
gaaagaggttccctgttgggatgctctattgatatcaccaatgctttggacatggaggct
gtgacttttaagaagctggtgaagggacatgcgtattctgtcacgggtctcagagaggta
aattaccgcggtaacaaagagaggctgatccgtatccggaacccttggggtcaagtcgaa
tggacaggagcttggagtgacaattcatcagagtggaacgggattgactctgctgataga
gaagaaatgaacaaccacatggaggatggcgagttctggatgtcttttcaggagttcaag
cgtcagttttctcggcttgaaatctgtaacctgacagcggacgctctgagcgaagatgct
cagagtttttggaacacgattaagtttaccggaagttggagaaaagggagtacggcaggc
ggctgcaggaaccaccccaatacattctggataaacccgcagtataaaatcaccctcctt
gaggaagatgatgatcctgaggatgaagaggttgcatgcagctttctggtggcactgatg
cagaaggacagacggcgttatcgcaaacagggacaggacatgcacaccatcggcttcgct
ttatataaggtcccggaagagtatcaaggcgctcagagcgttcacctcaagaaggaattt
ttcctgcgccagtcctcatgcggacgttcacagagtttcataaacctgcgtgaggtcagc
gcaagactgaagttgcctccgggcgagtacctcatcgtcccgtccacctttgagcccagc
aaagaggccgactttgttctccgagttttcacggagaaagccactgaaacacaagagatg
gatgatgaaatttcatttaacctggaagatgaagaggagatttccgaagcagacattgat
gagtcttttaaacgaatgttcgctcagctctccggcgaggacatggagatatccgttcat
gagttacaaaccattttgaaccgagtggtctgcaaacacggcgatcttaaaacagacggc
ttcggtatggagtcgtgcagatgtatggtcaacctgatggataaagatggcagcgcgcgg
ctgggactcgtggagtttcagatcctttggaataaagtcaggaagtggctgggaatttac
agacagtttgatctggataagtctggcaccatgagctcgtacgagatgcggctggcttta
gaagcggctgggtttaagctcaacaacaagctgcatcagatgctggtggcgcgatattca
gagggagagatgattgattttgacaacttcgtatgttgcctggtcaaactggaagcgatg
tttaaggcttttaaagagctggatagagaagggacaggggtcgcacagctcaatgtctgt
gagtggctgtacatgaccatgtgtggttga
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