Paramisgurnus dabryanus (large-scale loach): 135745622
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Entry
135745622 CDS
T10799
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
pdab03015
mRNA surveillance pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135745622
09122 Translation
03013 Nucleocytoplasmic transport
135745622
03015 mRNA surveillance pathway
135745622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135745622
03041 Spliceosome [BR:
pdab03041
]
135745622
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
135745622
Spliceosome [BR:
pdab03041
]
Common components
Common spliceosomal components
Cap binding complex
135745622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
FapA
AAA_11
MG280
Vfa1
DUF1690
Pox_Ag35
GBP_C
EMC3_TMCO1
DUF4407
tRNA_bind_2
WIT1_2_N
PHM7_cyt
LUC7
DUF1664
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
135745622
NCBI-ProteinID:
XP_073668246
LinkDB
All DBs
Position
16:complement(33756129..33768994)
Genome browser
AA seq
797 aa
AA seq
DB search
MSRRRHSDENDGGSQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEA
DLPNYKSKILRILCSVARLLPEKLTVYSTLVGLLNARNYNFGGEFVEAMIRQLKETLKSN
LYTEALYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDIPQVRSDWYVYAVLSSLPW
VGKELYEKKDVEMDRLLNQIEGYLKRRQKIHVPMLQVWTAEKPHPQEEYLDCLWAQVQKL
KKDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPAHSDDAVYPVPRVVFRMFDYTDAPE
GPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFGEL
FMLPAPPHIDVLYTSLLIELCKLQPGSLPQVLAQATEMMYMRLDTMNTVCIDRLINWFSH
HLSNFQFRWSWDDWADCLTQEPEKPKPKFVKEVLEKCMRLSYHQRIVDIVPSGFSTMIPA
DPLCHYKYGDETSASLPGYAVSITVSNAIKNRASNEEILTILKDVPNPNQDDDDDEGDTF
NPLKIDVFLQTLLHLAAKSFSHSFSALAKFHEVLKNLTESDEGKQHILRVLYDFWRNHPQ
MISVLVDKLIRTQIVDCAAVANWIFSSDMAHDFTRFYVWEILHSTIRKMNKHVQKIQKEL
DEAKEKLEKQQNKKQRDSGDEEDMEKNSEDEEGQLEEQIEKLQEKVESAQSEQKNLFLVI
FQRFIMLLTEHLVRCETGSIDINTTWYKNCIERLQQIFLMHHVIIQQYMGTLENLLFTAE
LDHHILAVYQQFCALQL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggcgaagacacagcgatgagaatgatggaggttcccaacctcacaaaaggagg
agaacatctgaacctattgagatcgaggaccgtctggagtcgctgatatgccgagtggga
gaaaagagtacgtcctccttggagagtaatttggaaggtcttgctggtgtcctggaagct
gatctcccgaattataaaagcaaaatcttacgcatcctatgttctgttgcaaggcttttg
cctgagaagctgacggtatacagcacgctggtggggcttctcaatgctcgcaactataat
ttcggaggagagtttgtggaggccatgattcgacaacttaaggagacgctgaagtcaaac
ctgtacactgaggcgctttacctggtgcgtttcctgagtgacctggtgaactgtcacgtc
attgcagctccctccatggtcgctatgttcgaaaactttgtcagtgttacacaggaagag
gacattccacaggtgcggtctgattggtatgtatacgccgtgctgtcgagcctcccatgg
gttggcaaggagttgtacgagaagaaggacgtagaaatggatcgcttgctcaaccaaatc
gagggctacctgaagcggcgacagaagattcatgttcccatgttgcaagtgtggactgca
gaaaagccccatccacaggaagagtatctagactgtctctgggctcaagtgcaaaagctg
aagaaggaccgctggcaagagcggcacatcctgcggccgtatatcgcatttgacagcgtg
ctgtgcgaagccctgcagcacaacctgccccccttcacccctccagcccactcggatgac
gccgtctatccagtgccccgcgttgtctttcgcatgttcgattacaccgatgccccagag
gggccggtaatgccaggcagtcattcggttgagcgttttgtcatcgaagagaatctgcac
tgtatcatcaagtcccactggaaagagaggaagacctgcgctgcccagttgctcagctac
cctggcaaaaacaagataccccttaactaccacatagtggaggtgatatttggggagtta
ttcatgttgcctgctccaccccacattgatgtcttgtacacgtcattactcattgagctc
tgtaaactacagccgggctccttaccacaagtccttgctcaagccacagaaatgatgtac
atgagactggacacaatgaacaccgtgtgtatagaccgactcatcaactggttctcacat
catttaagtaacttccagttcagatggagctgggatgactgggctgactgcttgactcag
gagcctgaaaagcccaaacccaagtttgttaaagaggttttggagaagtgtatgagattg
tcatatcatcagcggatagtggacatcgttccttctggtttctccactatgattcctgct
gatcccttgtgtcactataaatatggagatgagaccagtgcttcattgccaggatatgcg
gtgtcaatcacagtatctaatgcgatcaaaaaccgagcgtcaaatgaggagattctcacc
atattaaaagatgtaccaaatcccaaccaggatgatgatgatgatgagggcgacactttc
aaccctctgaagattgacgttttcctacagacgttgcttcatttggctgccaagtccttc
agtcattctttcagtgctctggccaagttccacgaggtcctaaagaacctaacagagagc
gatgaggggaaacagcacatcctcagggttctctatgacttctggaggaaccacccacag
atgatctccgtcttagtggacaagctgattcggactcagatcgtggattgcgcggccgtg
gccaactggattttctcttctgatatggctcacgatttcaccaggttttacgtgtgggag
attcttcactcgaccatccggaagatgaacaaacacgtgcagaagatccagaaagagtta
gatgaggcgaaagaaaagctggaaaagcaacaaaacaaaaagcagcgggacagtggcgat
gaagaggacatggagaagaacagtgaggatgaggaaggtcagttagaggagcagatcgag
aagcttcaggagaaagtagagtcggcccagagcgaacagaagaatctcttccttgttatt
ttccagcgcttcattatgttactgacagaacacctggttcgctgcgagaccggcagcatc
gacatcaacaccacctggtacaagaactgcatcgagaggctgcagcagatcttcctcatg
catcatgtgatcatccagcagtacatgggcaccctggagaacttgcttttcacagccgag
cttgaccatcacatcctggctgtgtaccagcagttctgtgctctgcaactatga
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integrated database retrieval system
