Paramisgurnus dabryanus (large-scale loach): 135747317
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Entry
135747317 CDS
T10799
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
135747317 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdab02000
]
135747317 (slc6a11b)
Transporters [BR:
pdab02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
135747317 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
135747317
NCBI-ProteinID:
XP_065122008
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Position
14:complement(33819983..33861287)
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AA seq
617 aa
AA seq
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MTAEKSIPIINGKADDTMDPETLNPSAVRKKDKKIVNERGQWNNKLEFILSVAGEIIGLG
NVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEG
IGYATQVIEAHLNIYYVVILAWAIFYLFNCFTTELPWASCGHYWNTENCVDYNNESIANL
SNPYATSPVIEFWERRVLRISSGIEEVGSLRWELALCLAIAWIICYFCIWKGPKSTGKVV
YVTATFPYFMLLILLIRGITLPGAANGIKFYLYPDMSRLSDPQVWVDAGTQIFFSYAICL
GCLTALGSYNSYNNNCYKDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESG
PGLAFIAYPKAVTMMPWAPLWACLFFLMLIFLGLDSQFVCVESLVTAIVDMYPKTFRVGY
RREMLILGMSVVSFLLGLIMLTEGGMYVFQLFDAYAASGMCLLFVAIFESICIGWIYGSD
RFYLNIEDMIGFKPIFFIKWCWKFFTPGICTGIFLFFLIKYKPLKYNNVYTYPDWGYGIG
WMMALSSMVCIPVGILYQIWKTKGTFRERIKKLTTPSPDLKMRGRLGSRGPCAINDADAK
MRADGKISTITEKETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgagaagtcgatccctattataaatggaaaagcggacgacacgatggacccg
gagacgttaaacccgagcgcggtgcgcaagaaggacaagaagattgtgaatgaaagaggg
cagtggaataataagcttgagtttatactgtcagtggctggagagattattggccttggc
aatgtatggaggttcccatatctgtgttacaagaacggtggaggtgctttctttgtacct
tatgtcattttcttcgtctgctgtggcatcccagtctttttcctggaaacagctttgggt
cagttcactagtgaagggggcatcacatgttggcgaaaagtctgcccactctttgaaggc
attggctatgcgacccaagtcattgaagcccatcttaatatttattacgtggtcatattg
gcctgggctattttctacctgttcaactgcttcacgacagaactgccctgggcatcgtgt
ggtcactactggaacacagaaaactgtgtggactataacaatgaaagtattgccaacctt
agcaacccatatgccacatcacctgtcatagagttttgggagcgacgtgtcctccgcata
tcctctggaatcgaagaagtcggcagccttcgctgggaactcgcgctctgtcttgcgata
gcctggatcatatgttatttctgcatttggaaaggtcccaaatcaacaggaaaggtggtg
tatgtcactgcaacctttccatatttcatgctattgattcttcttattcgaggaataaca
ctgccaggagctgctaatggaattaagttctacctgtatcctgatatgtcacgtctgtcg
gaccctcaggtatgggtggatgctggaactcaaatattcttctcgtatgccatatgtttg
ggttgcctgactgctcttggcagctacaacagctataataacaactgctacaaggactgc
atcatgttgtgctgtctgaacagtggcacgagttttgtggcaggatttgccatcttctct
gtgctgggatttatggcatatgaacagaatgtgccaatagaggcggtggcagagtcaggt
cctggtctagcattcatagcatatcctaaagctgtgaccatgatgccatgggctccactc
tgggcctgtctcttctttttaatgctcatcttccttggtttggacagtcagttcgtatgt
gtggaaagtcttgtgacggcaatcgtggacatgtatcctaaaaccttccgtgtgggctat
cggagagaaatgcttattctgggcatgtcggtggtctccttcttactaggtctgataatg
ttaacagagggtggcatgtatgtcttccagctctttgacgcatatgcagccagtggcatg
tgtctgttatttgtggccatctttgagtccatctgtatcggctggatctatggtagcgac
aggttttatttgaacattgaagacatgattggattcaagcccatcttcttcatcaaatgg
tgctggaagtttttcactcctggcatctgcactgggatctttctgttcttcttgatcaaa
tacaagcctctgaagtataataatgtgtacacatatccagactggggttatggcatcgga
tggatgatggctttgtcctcaatggtgtgcatccctgtgggaatcttatatcagatctgg
aaaacgaagggaaccttccgtgagagaatcaaaaagctgaccacgcccagccccgacctg
aaaatgaggggccgtctcgggtccaggggtccatgtgctatcaatgacgctgatgccaaa
atgagagcggatggcaagatctctaccatcacagagaaggagacacatttctaa
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