Paramisgurnus dabryanus (large-scale loach): 135759910
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Entry
135759910 CDS
T10799
Symbol
rapgef2b
Name
(RefSeq) rap guanine nucleotide exchange factor 2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04010
MAPK signaling pathway
pdab04517
IgSF CAM signaling
pdab04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135759910 (rapgef2b)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135759910 (rapgef2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135759910 (rapgef2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
PDZ_6
cNMP_binding
RasGEF_N
RA
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
135759910
NCBI-ProteinID:
XP_073668158
LinkDB
All DBs
Position
16:complement(28283523..28408053)
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AA seq
1602 aa
AA seq
DB search
MASYVDNSFRQAVMVNPSERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEFFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPIGRGYHTLPADF
SRLHLADGIHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEPGDMDLSGLPETAVDS
EEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRR
ELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTHPDGRTEILCMGNSFGVSPTM
EKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT
RKGHIVIKXXSERLTMHLVEEHSVVDPTYIEDFLLTYRTFLPGPMVVGKKLLEWFHDPSL
RDKVTRVVLLWVNNHFNDFEGDPSMTHFLEEFEYNLEREKMCGHLRLLNIACAAKAKLRV
VTLTKPSREAPLAFTLLGGSEKGFRIFIDSVEPGSKAAEAGLKRGDQILEVNGQNFENVP
LSKVNEILKNNTHLSITVKTNLLVFKELLARPDQDQDQDQDDEPDRKNGAPHIPKIGDIK
KATRYSIPDLAVDVEQVMGLEKASKKAKANTVGGRNKLKKIFDKTLTSILPPKPYNDVGV
GQSQDDSIVGLKQSKQIPPALPVSGNLSSSNPDLLQSHHRILDFNNQPDMSDQVLRVFKA
DQQSRYIMIGKDTTAKEVVAQAIREFALTAAAEAYSLCEVSVTPEGVIKQRRLPEQLSKL
ADRIQLSGRYYLKSNMETETLCSDEDAQELLRESHISLLQLSTVEVATQLSMRAFELFCA
IEPTEYIDDLFKLKSRLSGPPSLKLFEEAINRETFWVATEVVREPNQLKRMKIVKHFIKI
ALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFSDLQDLFDPSRNMAKYR
NLLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMAAVN
MDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQMA
RKVKQYLSNLTLETNEESLQTLSMQCEPSINTLPKTAGDRKRPDTSPVVARAVLHQRQQL
QKANQALQVPAVALYPSRKKVPVKDLPPFGTSSPGSLKKILSLSEESGHRKQAEDSVSNN
SSQLSSPPTSPHSSPKKGYGRAADYLSDSGHSEISSRSSLVSTSSLDMGQEERRQRYGGL
AGDGHCSGHRLERRATTDPDQYSLGSYSSMQDCRGLYAGATVLSSPSSEELTQDQGDRVS
LDAADSGRGSWTSCSSGSHDNIQTMQQGRSWEALAEGAGLWGSRGSWASACSSSSSVACW
GEESEGDTGTIKRRGGRDVTTDPETSSITSTGSEESRQQSRRPSPITAGNTKAVHTRKDG
RYRDPPPTPPGYTALTISDVTESSAHSGRKPPDYTTALQRSRLVTQSPDSQQPPAAGKPI
PSDPRGREEEEAEEVGEEGECLSPKLRSQRRRGPHTAVPPRP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctatgtggataacagttttcggcaagcggtgatggtgaacccctctgagagg
acgcaacaggacttggagatcgtatattcctacttgcatggcatggaggcgctgtccaat
cttcgggaacaccagctgaggataatgtgcgaaacagtccgctacgaaagacacgaggcc
aacgaagtgctctattatccggatgacattggcacatgctggtacattcttctctctgga
tcagttttcatcaaagagtccatgttcctgccgcggtcgagtttcggaaagaggtcggct
gggagcttgcgtcgtggatgcgagtgcatcgttctggagccgtcagagatgattgtggtg
gactatatggatgagaatgaggagttttttcagcgacaggcatcgcaccggcagtctcgc
cgcaggtttcgcaagatcaaccagaagggcgaacggcagaccatcatcgacacggtcgac
ccctatccagtcggcaagccgcccatagggcggggataccacacgcttccggcagacttc
agcagattacacctggcagacgggattcacccccaggtgacgcacgtttcctccagtcac
tcaggatgtagcatcaccagtgactctggaagcagcagcctgtcggacatctaccaggcc
accgagagtgagcccggcgacatggacctcagtggcctgcccgagacagccgtcgactcc
gaggaggatgacgatgaggaagacatcgaacgtgcctcagatcccctcatgagccgagac
attgtccgagactgcctggagaaagaccccatggacagaacggacgatgatatagagcaa
ctgttggagttcatgcaccagctaccagcctttgccaacatgaccatgtcagtcagacgg
gagctctgtgctgtcatggtgtttgctgtagtggaacgggccggcaccatcgtacttaat
gatggtgaagagctggactcatggtccgtcattctcaatggctctgtggaggtgacacac
ccagatggccggacagaaatcttgtgcatgggcaacagctttggtgtatcccctaccatg
gagaaagagtacatgaagggtgtgatgaagaccaaggtggatgactgccagtttgtgtgc
atagcacagcaggattactgctgcattttaaaccaagtagagaaaaacatgcagaaggtg
gaagaggagggggagattgtgatggtgaaggagcaccgtgaactcgatcgcacgggtacc
agaaagggacacattgttatcaagnnnnnntcggagagactcacaatgcacctagtagaa
gagcactcggtggtggaccccacctacatcgaggacttcctgcttacctaccgcaccttc
ctgccaggccccatggtggtgggcaagaaactgctggaatggtttcatgaccccagcctc
agggacaaggttacacgggtagttttgctgtgggtgaacaatcacttcaacgactttgag
ggtgacccctcaatgacacattttctagaggagttcgagtacaatctggagagagagaaa
atgtgtgggcacctgagactgttaaacatagcatgcgctgccaaagcaaagttgcgggtg
gtgaccctgaccaaaccctctagggaagccccgctggccttcaccctgctggggggttca
gagaagggctttcgtatcttcatcgacagcgtggagccgggcagcaaagctgcagaggct
ggccttaagcgaggagaccagatattggaggtaaacgggcaaaattttgagaatgtgccg
ctatccaaagtcaacgagatccttaaaaacaacacgcatctgtctattactgtgaaaaca
aatcttttagtgttcaaggaactgctggccagacctgaccaagaccaagatcaggaccag
gatgatgaaccagatagaaagaacggcgcccctcacattcccaaaattggggacattaag
aaagcgacccgctactctatccctgacctggctgttgatgtggagcaagtcatgggtctt
gaaaaagccagcaagaaagccaaagccaacaccgttggtggcagaaataaactgaagaag
atcttcgataagacactgaccagtattctaccacccaaaccgtacaatgatgttggggtg
ggtcaatcccaggatgacagtattgtaggactaaaacagtcaaaacaaatccctcctgct
cttcctgtcagtggaaacctttcatcaagcaaccctgacctgctgcagtcacatcatcgc
atacttgacttcaacaaccagcctgatatgtccgatcaggtattgcgagtgttcaaggct
gatcagcagagtcggtacatcatgatcggaaaggacacgacagctaaagaagtcgtagct
caggccatccgagagtttgccttgaccgccgccgccgaggcctattcgctttgtgaggtg
tcagtcacgccggagggtgtgatcaaacagcgccgcctccccgagcagctctccaaactg
gccgacaggatccaactgagcggcaggtactacctgaaaagcaacatggagacagaaacg
ctgtgctcggacgaagacgcacaagagctgctgcgcgagagtcatatcagcctgctgcag
ctcagcaccgttgaagttgcgacgcagctgtccatgcgtgccttcgagctgttctgcgcc
atcgagcccaccgaatacatcgatgaccttttcaagctcaagagccgcttgtctgggccg
cccagccttaagctcttcgaagaggccatcaatcgggagactttctgggtggccacagag
gtcgtacgtgaacccaaccagctcaagcgcatgaagatcgtcaagcacttcataaagatt
gcgttgcactgtcgcgaatgcaagaacttcaactctatgtttgccatcatcagtggtttg
aatttggcaccagtgtccaggctaagaggcacgtgggagaagttgcccagtaaatatgag
aagctcttcagtgatctccaggacctgtttgatccatccaggaatatggccaaatacaga
aaccttctcaacagccagaaccttcagccacccataatcccactgtttcctgtcatcaaa
aaagatctcacctttctgcatgaagggaacgactccaaggtggacggtttggtaaacttt
gagaagctgcggatgatcgctaaggagatcagacacgtgggccggatggcagctgtaaac
atggacccggctctaatgttcagaaccaggaagaagaaatggaggagtttggggtcactc
agccagggcagtgccaatgcagccgttttggatgtgacccagacgggcggccacaagaag
cgcgtcagacggagttccttcctcaatgccaagaagctgtacgaggacgcgcagatggcg
cgcaaggtcaaacaatacctgtccaatctcaccctggaaaccaatgaagagagcctacag
acgctctcaatgcagtgcgagccatcaatcaacacattgccgaagaccgccggagacaga
aagagacccgacacgtctcctgtggtggcacgggctgtcctccaccagcgccagcagctt
caaaaagccaaccaggcgctccaagtgcctgccgtggccctttacccatctcgaaagaaa
gtgccagtcaaagacctaccaccatttggtacaagctcaccagggtctctgaagaagata
ttgtccctttcggaggagtccggacacagaaaacaggcagaggacagtgtgtccaacaac
tcctcacaactgtcctctcctcccacgtctcctcacagctcacctaagaaagggtatgga
cgagcagctgattatctgtcagactccggtcacagcgagatctcctcacgctccagtctg
gtcagcacctcctctctggatatggggcaggaggagcgcaggcagaggtacggagggctg
gctggggatggtcattgcagcggccaccgtctggaacgcagggcgactaccgaccctgac
caatacagtttggggtcctactcatccatgcaggactgccggggtctgtacgccggcgcc
acggttctgtcctcccccagctccgaggagctcacccaggaccaaggcgaccgggtctct
ctcgacgcggccgattctggtcgtggcagctggacttcttgttccagtggttcccatgac
aacattcagaccatgcagcagggacgtagttgggaggcactagccgagggggcggggctc
tggggaagccgtgggagctgggcgtcagcttgctcctcttcgtcctcggtggcctgttgg
ggcgaggaatccgagggtgacacgggcacgatcaagcgacgaggagggagagacgtgacc
acagatccagaaaccagcagcatcacctccactggttctgaagagtccaggcagcaaagt
cgccggccctcgcccatcactgcgggcaacaccaaagccgtgcacacacgaaaggacggg
cgttaccgggaccccccgcccacaccgcccggctacacggcactgaccatctcggacgtg
acggagagctccgcccactcgggcaggaaacccccggactacacgaccgccctgcagcgt
tcccgtctcgtcacacagtcccccgactcccaacagccccccgctgcagggaagcccatc
ccgtcggacccccggggccgagaggaggaggaggctgaggaggtgggagaggagggtgag
tgcttgtctcccaaactcagatctcagaggaggagaggtccacacacagcagttcccccc
aggccatga
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