Paramisgurnus dabryanus (large-scale loach): 135771395
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Entry
135771395 CDS
T10799
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135771395 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135771395 (exosc7)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135771395 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
135771395 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
135771395
NCBI-ProteinID:
XP_065137687
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Position
19:complement(2244451..2249782)
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AA seq
291 aa
AA seq
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MAAVQLSEAEKVYIVHGVRDDLRLDGRGCEDYRHVEIETDVVSNTDGSAKISLGHTVVLV
GIKAEIGKPKPMVPEEGYLEFFVDCSANATPQFEGRGGEELGVELSNTLYKVFNNRRSVD
LRSLCISPGEYCWILYVDVLLLQCDGNLFDAISIAIKAALFNTRIAKVHISEDEEGGKEI
ELSDDPYDCMRLNVENVPCIVTLCKIGHRHVVDATLEEKACSVASVLISVTHKGTVTCVR
KMGGGSLDPESIFEMTEAGKRVGKTLHAPLMELLQKEESLGDKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggttcaactgagcgaagctgagaaggtttatattgtgcatggagttcgggat
gatttgagattggacggtcgaggatgtgaagattacaggcacgtggagatcgagacagat
gtggtgtctaacactgacggttctgccaaaatcagtctaggtcacacagtcgttcttgta
ggaataaaagcagagattggtaaacccaaacccatggtaccagaggaaggttatctggag
ttctttgttgactgctcagcaaatgccactcctcagtttgaggggcggggcggagaagag
ctgggggtggagcttagcaacacgctgtacaaagtgtttaataacaggcgcagcgtggat
ctgcgatctctctgtatttccccaggagaatactgttggattctgtatgtggatgtactg
ctgctgcagtgtgatggaaatctgtttgacgcaatatccatcgcaataaaagctgcactt
ttcaatacacgaattgccaaagtgcacatatctgaggatgaggaaggagggaaggagatt
gagctgtcagatgacccttatgactgcatgaggctcaatgtggagaacgtgccctgtatc
gtaaccctgtgcaagatcggtcacagacatgttgtagatgccaccctggaggagaaagcc
tgttctgtagccagtgtcctgatatcagtcacacataaaggtacagtcacatgcgtcagg
aagatgggaggaggcagtctggaccctgagagcatctttgagatgacagaggctgggaag
cgtgtggggaaaacacttcatgctcctctcatggaactactacagaaagaagaaagcctg
ggcgataaaagacagaaagtgggtttccttggataa
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