Paramisgurnus dabryanus (large-scale loach): 135773964
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Entry
135773964 CDS
T10799
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
135773964 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135773964 (cngb1a)
Ion channels [BR:
pdab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
135773964 (cngb1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
135773964
NCBI-ProteinID:
XP_073671765
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All DBs
Position
9:complement(38367828..38403501)
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AA seq
1284 aa
AA seq
DB search
MFSWVVKVVPQPPAPPGKLGDEASPSATDTDVGKKQQVKEPDPAKPKEASEENSSQSGVL
SWLSHGFSTALPQPVNTSKLVNTEAKQEDNAASNSTTGMIGWIVQGLGKVVPQPDEKCKG
HTEPQEITEAAAAPAVKVDPPVYEVKDLHDTEPLPHIPVVEIVSDEEPDTANTSFSPGVM
EWIKQGLEKVVPQSPVHLQAPSSSDAKVLKAVSAPVTPCRQAPTSAPISTPAPAPATLEP
PKVVEDSKSVSKEKEMNMVDWIVQGIGRIMPQPVLPPKEESPDYVQNICILQDTCDMMLE
EVDSDWETQQKEQSSGQDVQAEEQVHQESTALLQVLPNIVPQVLAMQQQDDAETQTERWT
PLIESIRKEAEETAIANLQERLQQERVEAARMAEDLARHAAELAVRQLEEEHTIQIISEP
KDEEQDNENQLPNIQEEEIEEDPECNVDVCPAEPSPHQSEASDQMTHSPQPPKPLKTETA
SPPVTTQPERVTSSPLDRDKDQETLEESCGESTHVNPALKVEDVEDGEMMVPQIIVAPES
MTLTVPQQNLTQCRSFLYAKKIPQSVGDDDDAGKSKASLEEDVIQTVALRVDEGPERPMS
AASQKSIVVNERLQELVKLFKERADRAKDKLIDPDESDHESPSASPAKKADEAPPPSPPP
EEKKDEGAEEEKEEEVQFYEFMGHNFKVPQFKMPQIPDWLRVILEYRFPSSIDQYTDLIY
VVWLFFVTFAWNWNVWLIPVRWAFPYQTPDNIHWWLFMDYFCDTIYVLDILVFQPRLQFV
RAGDVVCDKKDMREHYMQTERFKMDVISLFPLDLLYVFTGVKSVLRFPRLLKYHAFFEFN
DRLEAVMSKAYIYRVIRTSAYLLYSLHCNACIFYWGSDYEGLGSTKWVYNGKGNSYIRCY
YFAVKTLITIGGLPDPTTVFEIVFQLVNYFVGVFAFSIMIGQMRDVVGAATAGEAYYRHC
VDSTVKYMSSYKIPREVQNRVKTWYDYTWKSQGMLDEQELLMQLPDKMRLDIAADVNYSI
VSKVALFQGCDRQMIFDMLKRLKSVVYLPEDFVCKKGEIGREMYIIKAGEVQVVGGPDGK
TVFVTLRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKDLAEILVHYPESEKLL
RKKAKKMLTKDKKPTEEKVKDTGEVIPPRPETPKLFKAALEVAKGQTFTKLKETYKGASL
EPSTPAYGSTATGPIPPPSPIHRRSPIPRFHVPDEDDMVSETTDSTVIIRMTPRVEGEEI
LSVEVSPAETVQRGEEEPGKTEKK
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgggtggtaaaagttgttcctcagcccccagcacctccggggaaactggga
gatgaggcaagtccgagcgcaacagacacagatgtaggcaaaaaacagcaagttaaagaa
cctgacccagccaagcccaaggaggcctcagaggagaacagctctcagagtggagtttta
agttggctttctcatgggttcagcactgccctccctcagcctgtaaacacctctaaattg
gttaacaccgaagctaagcaagaggacaatgcagcgagcaacagcacaactgggatgatc
ggctggattgtgcagggactgggaaaagtggttccacagccagatgaaaaatgcaaaggc
cacaccgagccacaggagattactgaggctgcagctgctccagcagttaaagtggatcca
cctgtgtatgaggttaaagacctgcatgatactgagccccttcctcatatccctgtggtg
gaaatagtgtctgatgaggagccagacacagcaaacacatccttctctcccggtgtgatg
gaatggatcaaacagggtcttgagaaggtagttcctcagtctccggttcaccttcaggct
ccctccagttcagacgctaaggtcctgaaggctgtttctgctcctgtgacaccctgcaga
caagcgccgacatctgctcctatatccacacctgcgcctgcacctgcaactcttgaacca
cccaaagtagttgaagactctaaaagcgtgagcaaagaaaaggagatgaatatggttgac
tggattgtacagggaattggacgcataatgccacagccggtactgccaccaaaagaggag
agccctgattatgttcaaaacatatgtatcctgcaggacacttgtgatatgatgctggag
gaggtggactcagactgggagactcagcagaaggagcaaagttctggacaggacgtccag
gctgaagagcaggtgcatcaggagagcacagcccttctgcaggtgttgcccaacatcgta
ccacaggtgctggccatgcagcagcaagatgatgctgagacccagacagagcgctggacg
cctcttattgagagcatcaggaaagaagcagaggagactgctattgcaaacttacaggag
agactccagcaggaacgtgtggaggcagctcgtatggcggaggatctggcccgacatgct
gcagagttggctgtcagacagctggaagaagagcacaccatacagatcatctcagagccc
aaagatgaagaacaagacaatgagaatcaactgccaaatatccaggaagaagagattgaa
gaagacccagagtgcaatgtggacgtctgtccggcagagccctcaccacatcaatctgaa
gcttcagatcagatgacccatagtccacaaccacccaaaccattaaagacagaaacagcg
tctccacctgtgaccacacaacctgagcgtgtcacatcttcaccacttgacagggacaag
gatcaggaaactcttgaagaaagctgtggagaatccacccatgtaaatccagcactgaaa
gtggaggacgtagaggatggagagatgatggttcctcaaatcattgtggccccagagtca
atgaccctcactgttcctcaacaaaatctgacgcagtgccggtctttcctatacgcaaaa
aagattccccaatctgttggtgatgatgatgatgcaggtaaatcaaaagcaagtctggag
gaggatgtgatccagactgttgcgctccgtgtggatgaaggacccgagcggcccatgtct
gcagccagtcaaaaaagtatagtggtgaatgagcgtctgcaggagctggtcaagctgttt
aaagagcgagcggatcgtgcgaaagacaaactgatcgacccggatgagtccgatcatgag
agcccatcagcatctccagccaaaaaggcagatgaagccccacctccttcaccacctcca
gaggaaaagaaagatgaaggtgcagaagaggagaaagaagaggaggtgcaattctatgag
tttatgggtcacaattttaaagttccccagttcaaaatgcctcagattcctgattggcta
agagtcatactggagtaccgcttcccatccagcattgaccaatacacagatctgatctat
gtagtttggcttttctttgtgacgttcgcttggaattggaatgtgtggctcatccctgtg
cgctgggctttcccgtaccagacacctgacaacatccactggtggcttttcatggattac
ttctgtgacaccatttacgttctggacatcctggtgtttcagcccagactgcagtttgtg
agagcaggggatgttgtgtgtgacaaaaaggacatgagagagcactacatgcaaactgaa
cgatttaagatggatgtgatcagtctctttcctctggatttactgtacgtcttcacgggt
gtcaaatcagttctgcgctttcctcgccttcttaagtaccatgcattctttgagtttaat
gatcgtctggaagctgtgatgagcaaagcttatatttatagagtaatccggacgagcgca
tacctgctttattcactgcactgtaatgcctgtattttctattgggggtctgattatgaa
ggtttgggctccaccaaatgggtctataatggcaaaggaaacagttatatacgctgttat
tacttcgctgtgaagacattgatcaccattggaggtttgcctgatcccacaaccgtcttc
gaaatcgttttccagcttgtcaactactttgtgggagtttttgctttctcaatcatgatt
ggtcagatgcgagatgttgtcggagctgccacagctggtgaggcgtactacagacactgt
gtggacagtactgtaaaatacatgtcttcctacaagatcccccgcgaggtccaaaaccgt
gtgaagacctggtatgactacacctggaagtcgcaaggcatgctggatgagcaggagtta
ctcatgcagctgcccgataagatgcgtctagacatcgctgcagatgtcaactactccata
gtcagtaaagtagcactctttcagggttgtgacagacagatgatatttgacatgctaaag
agactgaagtctgtggtttatcttccagaagactttgtctgtaaaaagggtgagattggc
agagagatgtatatcatcaaagctggagaggtgcaggtggtaggagggcctgatgggaag
actgtgtttgtgactttaagagctggctctgtgtttggggaaatcagtttgcttgcgggt
ggtggtggaaacagacgaacggctaatgtaaaagcccacggttttgctaacctcttcatc
ctggataagaaggaccttgcggaaatcttagtgcactaccccgaatctgagaagcttctg
cgcaagaaggccaaaaagatgctgaccaaagacaagaaacccacagaagaaaaggttaag
gatacaggcgaggtcatccctccacggccagagacccctaaactcttcaaagctgccttg
gaggttgccaaaggacagacattcaccaagctgaaggagacttataaaggggcatctctg
gagccatccactcctgcttatggcagcactgccacaggtccaattcctcctccctcccct
atccaccgacgttcaccgattcctcgttttcatgtgccagatgaagatgacatggtatca
gagacgacagacagcaccgtgattatccgcatgactccacgtgttgagggagaggagatc
ctctctgtggaagtcagcccagcggagacagtacagcggggagaggaagaaccaggaaaa
actgaaaagaagtga
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