Pocillopora damicornis (lace coral): 113668190
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Entry
113668190 CDS
T05773
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdam04040
]
113668190
Ion channels [BR:
pdam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113668190
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank
Ank_2
Ank_3
TMEM128
PKD_channel
DUF3021
Motif
Other DBs
NCBI-GeneID:
113668190
NCBI-ProteinID:
XP_027039866
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
LHGGADLELALLHAVRESDVRGVEILLQFHDPSSPKRMSPDSMSLKYQRHFTPLILAARL
QNFKIVKLLLEHGFSIPNLPIDLKKPVGSEINFDEKLGLTLFRLNRYRALASPVYMAASF
LQNPFSDPDPVHRACALSKELSHMAEREHEFRQEYLELSDGCKEFTVDLLNGCRSMKEIR
CVMEMENEKSTPLNTDGVVLNILEFAIVTRNEKFVSHPYSQLVLKSEALRHVPFLENSPG
KRFTVVLLSSLLSPLIFAIWLAFETFLPRHKVARMFHSPCLKFLTNCGAYQIFLFVLTLT
SFQRDTQFLEYSINDWIVVAFVIGHLVDFVKEVFQQGRVRFFANKWNYLAVVRVTLFVLC
YVMGWFARTSIVDRGDSLQWENHSDDRSYKVVLFSECVFAVAILLAFAHNFSFIEENAVM
GPLLQAFILMLFDVMKFFFFFVFAFLAFVVSFTKLYLQYEKAKDHFISRKVITNETDPLH
LERFSSSVSTIFWSLFGQIDRDNFKIDETEYETIWRTGMVLFGAFNIVAVLVALNMLIAM
LNESYTRITTNLDTEWNFTRTKLWLSWLYKKGILTSPCNLLYLVLPLFWVLKNLLGVCCP
RKIKLFVGKFVPEKPKPSWKIRRTNERERREVMRHLILRNLAKKSCHLEPGNASDDSHEE
YDIEST
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
cttcatggtggagccgacttggaactcgccttgttgcacgccgtgcgtgagagtgatgtg
agaggtgttgaaattttgctccagtttcacgatccttcatcaccaaagcggatgtctcca
gattcaatgagcttaaaataccaacgtcacttcacgccattgatcctggcggcccgcttg
cagaatttcaaaattgtaaaactcctcttggaacatggattctccattcccaatttaccg
attgatttaaaaaagcctgttggctcagaaatcaactttgatgaaaaactgggactcact
ttgtttcgtttaaacagataccgagctttggcaagtcccgtgtacatggcggcgtcgttt
ctccaaaaccccttcagcgatcctgatcctgtccatcgcgcatgcgctcttagtaaggaa
ttgtctcacatggccgaacgggagcacgagttcagacaagagtatttggagcttagtgat
ggttgtaaagagtttactgtggatctgttaaatggatgccgctcaatgaaagagatcagg
tgtgttatggagatggagaacgaaaaaagtacaccattaaacacggatggagtggttttg
aacattctggaatttgccatagttaccaggaatgaaaagtttgtcagccatccttacagt
cagctggtattgaagtcagaagccctcagacatgtcccattcctggaaaacagcccaggg
aaaagatttacagtggtgcttttatcatctcttttgtctcctttgatctttgcgatttgg
cttgctttcgaaacctttctgcccagacacaaggtagccagaatgttccattcaccttgt
ttaaaatttctcaccaattgcggagcttatcaaatttttcttttcgtgcttactttgact
tcgttccaacgagacacgcagttcctggaatattccatcaatgattggattgttgtggca
ttcgtcatcggacacttggtagattttgttaaagaagtttttcaacaaggaagagttcgc
ttctttgcaaacaaatggaactatctagctgtggttagagtgaccttgtttgttctttgt
tacgtcatgggttggtttgcccgtacaagtattgtagacagaggggattctttgcaatgg
gagaaccatagcgacgatcgttcctacaaggttgtgctgttttccgagtgtgtttttgct
gtggcaatacttcttgcatttgcgcacaacttctcatttatcgaagaaaatgccgtcatg
ggcccattgttacaagcattcattctgatgttgtttgatgtaatgaagttcttctttttt
tttgttttcgcttttctggcatttgttgtgagtttcacgaagttatacttgcagtatgag
aaagctaaggatcattttatttcacgtaaagtgatcacaaacgaaacagaccccttgcac
ctagaaaggttttcaagcagtgtttccaccatcttttggtctttattcggccaaatcgac
cgtgacaattttaaaatcgacgagacagaatatgaaacaatatggagaacaggcatggtg
ctgtttggcgcgttcaacattgtagcagtattagttgctctgaatatgctaatcgccatg
ttgaatgaatcttacacaaggataacgaccaacttagatactgagtggaattttaccaga
acaaaactatggttaagctggctttacaagaaaggcattctcacttccccttgtaatctt
ctctacctggttcttccacttttttgggttttaaagaatcttttgggagtttgctgccca
agaaaaataaagttatttgtgggaaagttcgttccggaaaagccaaagccctcctggaaa
ataagaaggactaacgaaagagagagacgagaagtgatgcgccatctaatcctgaggaac
ttggctaaaaagtcatgtcatttagagcctggtaacgcgtcagatgattcgcacgaagaa
tatgacattgaaagcacc
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