Pocillopora damicornis (lace coral): 113668585
Help
Entry
113668585 CDS
T05773
Name
(RefSeq) paraspeckle component 1-like isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdam01009
]
113668585
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdam03021
]
113668585
03041 Spliceosome [BR:
pdam03041
]
113668585
Protein phosphatases and associated proteins [BR:
pdam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113668585
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113668585
Spliceosome [BR:
pdam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113668585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_ACIN1
RRM_10
DUF4651
RRM_3
Motif
Other DBs
NCBI-GeneID:
113668585
NCBI-ProteinID:
XP_027040318
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MPASRSRSRSPRRISTSSKPNSRELITIKTEKDSENSTNKNTDSSASQSTKPSEKPFRKP
LESSASKSSGASNWSSSHKTKERKFSGRCRLFVGNLTNCDEKELRDMFEKYGEVAEVFVN
KDKGFGFVRLDTRLNAEAAKQAVDNQYRNGRTLRVRFAQHAAALKVLNLGPTVTNELLHQ
AFSQFGDVERAIVVCDDRGKSKGHGIIEFSRKNSAQTALQQVNDGLFLLGRTPCPVSVKQ
LEHIEDEDGILDEHMKRNPAFQKEREAQPHFVSPNTFESEWAQRWRALEEMEGSQREALD
KQFKEARDKLQGEMDQAIQEHEAVLMRQEIQRRQDELRRFEEMRQKEEMMRKAELRRQEE
MRLQEELQRREEELRHKEELFRQQQRELQRHRQEDMYLQDSMRHMDTNIPPGMPPMGPPG
GDWGRGRGGPPPRGPPGRGGPLGRGGPGFGPRPPGPGMGNPPRMGPGMMPPRGPPMGGPP
PGPRGPMGPGMRPNGPRPRFENERERDREMVDRDRLAARSREPPSRDRGDFKRPRY
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgtctcgctctcgatcgagatcgccgaggaggatttcgacttcatcaaaaccg
aattctcgtgagcttatcacgattaaaaccgaaaaagactccgaaaatagcacaaataag
aacactgactcttcagcttcccagagcaccaaaccaagtgagaagcctttccgaaagcca
ttagaatcgtcagcctccaaaagtagcggcgcgagcaattggagttcatcacacaaaact
aaggagagaaagttttccggacgatgtaggcttttcgtggggaacctgaccaactgcgat
gagaaggagcttagggatatgtttgaaaagtatggagaggtggcagaggtttttgtaaac
aaggataaaggatttggtttcgtgagactggatacacgtctgaatgcagaagctgctaaa
caagctgttgataaccagtatagaaatggaagaactttgcgtgtgcgatttgcccaacat
gcagctgctctgaaagtactaaatcttggtccaacagtcacaaatgagctgttacatcag
gctttttcacagtttggtgatgtggagcgagccattgttgtctgtgatgacagaggaaaa
tccaaaggacatggtattattgagttttcaagaaagaactctgctcaaactgctttgcag
caagttaatgatggcttattcctccttggaagaaccccatgtcctgtatctgtcaaacag
ttagagcatatagaagatgaagatggtattttagatgaacatatgaagagaaatcctgca
tttcaaaaagagagagaagcccaaccacactttgtgtcacccaatacatttgagtcagaa
tgggcccagagatggcgagcattggaagaaatggaaggatcccagagagaagctctagac
aaacagtttaaagaagctcgtgataaattgcaaggggaaatggatcaggctatccaagaa
catgaagctgtactaatgagacaagaaattcaacgtcgtcaagatgagcttcgtcgattt
gaagagatgcgtcagaaagaagagatgatgaggaaagcagaattaaggagacaagaagaa
atgcgtcttcaggaagaattgcagcggagggaagaagagctgcgacataaggaggagctc
ttcaggcagcaacagcgagaacttcagaggcatcgacaagaggacatgtacctacaggat
tctatgcggcatatggatactaacatcccaccaggaatgcctcccatgggacctcctggt
ggagactggggaagagggcgtggtggaccacccccacgaggaccaccaggaagaggtgga
ccactaggccgtggagggccaggctttggtcctcgtccaccaggtccagggatggggaac
cctccaaggatgggcccaggaatgatgccacctagaggaccacctatgggaggtccacct
ccaggccctcgtggacccatgggaccagggatgagacctaatgggccgaggccaagattt
gaaaatgaaagggaacgtgatcgtgaaatggtcgatcgtgatcggcttgctgcacgctca
cgagagccaccttcaagagaccgtggagatttcaagagacctcgttactag
DBGET
integrated database retrieval system
