Pseudoxanthomonas daejeonensis: MNQ95_12815
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Entry
MNQ95_12815 CDS
T08066
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pdd
Pseudoxanthomonas daejeonensis
Pathway
pdd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNQ95_12815 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdd03019
]
MNQ95_12815 (pnp)
03016 Transfer RNA biogenesis [BR:
pdd03016
]
MNQ95_12815 (pnp)
Enzymes [BR:
pdd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MNQ95_12815 (pnp)
Messenger RNA biogenesis [BR:
pdd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MNQ95_12815 (pnp)
Transfer RNA biogenesis [BR:
pdd03016
]
Prokaryotic type
tRNA degradation factors
MNQ95_12815 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KhpA-B_KH
S1_2
Phage_tube
KH_5
CsrA
Motif
Other DBs
NCBI-ProteinID:
UNK57013
LinkDB
All DBs
Position
2852646..2854751
Genome browser
AA seq
701 aa
AA seq
DB search
MAKITKTFQYGKHQVTLETGEIARQAGGAVIVKFDDTVLLVSAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPLRPLFPEEFRNEVQVIATVMSLN
PEIDGDIPALIGASAAVALTGAPFNGPIGAAKVGYINGEYVLNPTVSELKTSKLELVVAG
TSNAVLMVESEAAELSEEVMLGAVMFGHREMQKVIAVINELVAEAGKPKWDWQPPAKNEG
LIAALRHAVGDSLAGAFQVRDKLERRDTISSLKKAILGTLAPQAETHSWSAGDLSKEFSE
QEYQTMRNSVLKTKVRIDGRALDQVRPINSQVSVLPRVHGSSLFTRGETQAIVAVTLGTA
RDGQVIDAVSGEYKDHFLFHYNFPPYSVGEAGRMMGPKRREIGHGRLAKRGVLAVMPTME
AFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTENGVSALQMDIKIEGITEEIMKQALSQAKAGRLHILGEMAR
AMTSPRQELSEFAPRLITIKIHPDKIREVIGKGGSVIQAITKETGTQIDIQDDGTITIAS
VNGAAGQAAKARIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISNDRV
EKVGDALKEGDLVKVKVLEVDKQGRIRLSIKAVEEGEGVTE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcaccaggtcaccctggaaaccggc
gagatcgcccgccaggccggcggtgccgtcatcgtcaagttcgatgacaccgtgctgctg
gtttccgccgttgcagcgaagtcggcccgcgaagggcaggacttcttcccgctgacggtc
gactaccaggagaagttctacgccggcggccgcatcccgggtggcttcttcaagcgcgaa
ggtcgcgcgaccgagaaggagacgctgatctcgcgcctgatcgatcgcccgctgcgtccg
ctgttcccggaagagttccgcaatgaagtgcaggtcatcgccacggtgatgtcgctgaac
ccggaaatcgacggtgacatcccggcgctgatcggtgcttccgccgccgtcgccctgacc
ggcgcgccgttcaacggcccgatcggtgccgccaaggtcggttacatcaacggcgagtac
gtgctgaacccgaccgtcagcgagctgaagacctccaagctcgagctcgtcgtcgccggc
acctccaatgccgtgctgatggtcgagtccgaagcggccgagctgtcggaagaagtgatg
ctgggcgcggtcatgttcggccatcgcgagatgcagaaggtcatcgccgtcatcaacgag
ctggttgccgaagccggcaagccgaagtgggactggcagccgccggccaagaacgaaggc
ctgatcgccgcgcttcgccatgccgtgggcgacagcctggccggcgcgttccaggtgcgc
gacaagctcgagcgccgcgacacgatctccagcctgaagaaggccatcctgggcacgctg
gcgccgcaggccgagacccattcgtggtccgccggcgacctgtccaaggagttcagcgag
caggaataccagaccatgcgcaactcggtcctcaagaccaaggtccgcatcgacggtcgc
gcgctggaccaggtccgtccgatcaattcgcaggtcagcgtcctgccgcgcgtgcacggc
tcctcgctgttcacccgtggcgagacccaggccatcgtcgcggtcaccctgggcaccgcg
cgtgatggccaggtcatcgacgcagtgtcgggcgagtacaaggaccacttcctgttccat
tacaacttccccccgtactcggtgggcgaagccggccgcatgatgggcccgaagcgtcgc
gaaatcggccacggccgcctcgccaagcgcggcgtgctcgccgtgatgccgaccatggaa
gcgttcccctacaccatccgcgtggtctcggagataaccgagtccaacggctcctcctcg
atggcatcggtctgcggcagctcgctggcgctgatggatgccggcgtgccgatcaaggcg
ccggtggcgggcatcgcgatgggtctggtcaaggaaggcgacgacttcgtcgtgctgtcg
gacatcctcggtgacgaagaccacctgggcgacatggacttcaaggtggccggtaccgag
aacggcgtgtccgcgctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggcgctgtcgcaggcgaaggccggccgcttgcacatcctgggtgaaatggcccgc
gcgatgacctcgccgcgccaggagctcagcgagttcgcgccgcgcctgatcaccatcaag
atccaccccgacaagatccgcgaagtgatcggcaagggcggttcggtgatccaggcgatc
accaaggaaaccggcacgcagatcgacatccaggacgacggcacgatcaccatcgcttcg
gtgaatggcgctgccggccaggccgccaaggcccgcatcgagcagatcacctcggacgtc
gagccgggccggatctacgagggcaaggtcgccaagatcatggacttcggcgcgttcgtc
accatcctgccgggcaaggacggcctggtccacgtgtcgcagatctccaacgatcgcgtg
gagaaggtcggcgatgcgttgaaggaaggcgacctggtcaaggtcaaggtgctggaagtc
gacaagcagggccgcatccgcctgtcgatcaaggccgtcgaggaaggcgagggcgtgacg
gagtaa
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