Paracoccus denitrificans: Pden_0003
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Entry
Pden_0003 CDS
T00440
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pde
Paracoccus denitrificans
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pde03016
]
Pden_0003
Transfer RNA biogenesis [BR:
pde03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Pden_0003
Prokaryotic type
Methyltransferases
Pden_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
ABC_tran
Dynamin_N
FeoB_N
AAA_28
DUF7686
HflX_C
AAA_29
GTP_EFTU
RsgA_GTPase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABL68120
UniProt:
A1AXX6
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All DBs
Position
1:2030..3289
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AA seq
419 aa
AA seq
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MDTIFAEATPPGRGGVSVVRLSGPKAHATLESLAGPVATPRMAALRALRDGDDLIDRALV
IWFAEGHSFTGEEVAELHLHGAPVIASRLSQALLARGLRRAEAGEFTKRAFLNGRIDLAE
AEGLADLLSAETEAQRKLAMRATEGELGRKADELRSKLIRAGALIEASIDFADEEVPDEV
PEEALDLIKAVRSDIQGMLASYPATERLRQGYEVAIIGPPNAGKSTLLNRIGQREIALVS
EIAGTTRDILELHTDLRGLPVTFLDTAGLRESSDPVEAMGVARAVQRAAEADLRIHLSVD
GVPEETLVLGDIIVRSKADLGRGEETAISGLTGEGVAELLDLVYDRLRVRAADSGLVGHK
RQAEALQRAVAALAIDDSLAPEFLAEALRQAAQALAMMVGRVGAEDYLDEIFSSFCIGK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtggatacgatctttgccgaggcgaccccgcccggtcgagggggcgtttccgttgtccgc
ctcagcggaccgaaggcgcatgcgacactggaatccctggctggaccagttgcaacgccc
cggatggcggcgttgcgggcgttgcgggatggcgacgacctgatcgaccgcgcgctggtg
atatggtttgcggaaggtcacagctttaccggcgaggaagtggccgaactgcatctgcat
ggcgcgcccgtcatcgccagccgactgtcgcaggcgttgctggcaaggggattgcggcgc
gccgaagcaggcgaatttaccaagcgcgccttcctcaacggtcgcatcgatctggccgaa
gccgaaggtctggctgacctgctttcagccgagaccgaggcacagcgcaagcttgccatg
cgagcgacggaaggcgagttgggacgcaaagccgacgagctgcggtccaaactgatccgc
gccggcgcattgatcgaggccagcatcgattttgccgatgaggaagtgcccgatgaggtt
cctgaagaggcgttggacctgataaaagcggtccgcagcgatatccaggggatgttggca
agctatccggccaccgaacggctgcgccagggctatgaagtggccatcattggaccgccg
aatgccgggaaatcgactttgctgaaccggatcggccaaagggaaatcgcgctggtttca
gagattgcggggaccacgcgggatatccttgaattgcatacggatttgcgtggcttgccg
gtaaccttcctggatacggccggtctgcgcgagagcagtgatccggtagaggcgatgggg
gttgcacgagctgtgcaacgggctgcggaagcggatctgcgcatccatttgtcggtcgat
ggcgttcctgaagaaaccttggtgctgggcgatattatcgtccgttccaaggcggatctg
ggccggggcgaggaaactgccatttccggcctgaccggggaaggggtcgcggagcttctg
gatttggtctatgatcgcctgcgagtcagggctgccgattcagggttggttgggcacaag
cggcaggcagaggccttgcagcgcgcggtggcggctttggcgattgacgacagcttggca
ccggagtttctggcagaagccttgcggcaggcagcgcaagcgttggcgatgatggttggg
cgggtcggggctgaggattatctggacgagatcttcagttccttctgtatcggaaagtaa
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