Peteryoungia desertarenae: FE840_004175
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Entry
FE840_004175 CDS
T07298
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pdes
Peteryoungia desertarenae
Pathway
pdes02024
Quorum sensing
pdes03060
Protein export
pdes03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pdes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FE840_004175 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FE840_004175 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FE840_004175 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdes02044
]
FE840_004175 (ffh)
Enzymes [BR:
pdes01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FE840_004175 (ffh)
Secretion system [BR:
pdes02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FE840_004175 (ffh)
Eukaryotic Sec-SRP protein
FE840_004175 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_33
AAA_30
AAA_19
AAA_22
AAA_31
APS_kinase
AAA_14
6PF2K
Thymidylate_kin
AAA
AAA_16
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QLF68806
LinkDB
All DBs
Position
complement(890564..892126)
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AA seq
520 aa
AA seq
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MFENLQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALEVVRDFIERVREKAV
GAAVLKSIKPGQMVVKIVHDELVEMLGSEGVGVDLIAAAPVVIMMVGLQGSGKTTTTGKI
AKRLTDRDRKKVLMASLDTRRPAAQEQLRQLGVQTGIDTLPIIAGQSPTDIASRAVQAAK
LGGHDVVLLDTAGRTHIDEPLMIEMAEIKSRAKPHEILLVADALTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMTELDEFHPRRIADRILGMGDI
VSLVEKAAENIDAEKARAMAEKMAKGKFDLNDLAEQIKQMQAMGGMGGIMGMMPGMAGMK
DKMSAAGLDDKIFKRQLAIISSMTKAERANPDILKHSRKKRIASGSGTDASDINKLLKMH
RQMADMMKAMGGKKGGGMMKQMMGGMAAKMGLGGMGGMGGMPDLSKLDPKQLEALAKQAE
SAGIKPGGLPGLGGGGLPGLGGPRLPGLGGGGLPGLPKKK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctccaggaccgtcttggttccatcctgaatggactgaccggccgtggc
gccttgtccgaggcggatgtctcggcggcgttgcgtgaggtgcgtcgtgcgcttcttgaa
gcggacgtagcgctcgaggtcgttcgtgacttcatcgaacgcgttcgtgaaaaggctgtc
ggggcagccgtcctgaaatcgatcaagcccggccagatggtcgtcaagatcgtccatgac
gagctggtcgaaatgctcggcagcgagggcgttggcgtcgatctcatagcagcagcccct
gtcgtcatcatgatggttggtctgcagggttccggtaagacgacgaccacgggcaagatc
gccaagcgattgactgatcgcgatcgcaagaaggtgcttatggcatctctcgatacccgt
cgtccggcagcccaggaacagcttcgccagctcggtgtccagacgggtatcgacacactg
ccgattattgccgggcagtcgccgacggatattgcatcgcgtgccgtgcaagctgcaaag
cttggtggtcatgacgttgttcttctcgatacggccggtcggacccatatcgacgaaccg
ctgatgatcgagatggccgagatcaagtctcgcgccaagccgcatgaaatccttctggtt
gccgatgccctgaccggtcaggatgccgttaatctcgcgcgcaatttcgatgagcgcgtc
ggcattaccggccttgtgttgacccgtatggacggtgatggccgtggcggtgcagcgctt
tcgatgcgtgccgtcaccggaaaaccgatcaagctgatcggcgtcggtgaaaagatgacg
gaactcgacgagttccacccgcgtcgcatcgccgaccgtatcctcggcatgggcgacatt
gtttcgctggtcgaaaaggcggccgaaaacatcgacgctgaaaaagcccgcgcgatggcc
gagaagatggccaagggcaagtttgacctcaacgacctcgccgaacagatcaagcagatg
caggccatgggtggcatgggcgggatcatgggcatgatgccgggcatggccggcatgaag
gacaagatgtcggcagccggcctggatgacaagatcttcaagcgccagcttgccatcatt
tcctcgatgaccaaagccgagcgtgccaatcccgatatcctcaagcattcccgcaagaag
cgcatcgccagcggctccggtacggacgcttccgatatcaacaagctgctcaagatgcac
cgccagatggccgacatgatgaaggccatgggcggcaagaagggcggcggcatgatgaag
cagatgatgggcggtatggcggccaagatgggtcttggcggcatgggtggaatgggcggc
atgcctgatctttccaagctcgaccccaagcagcttgaagcccttgccaagcaggcggaa
tccgccggaatcaagccgggtggcctgccaggtcttggcggcggtggattgccgggcctt
ggtggtccgcgtctacccggtctgggcggtggtggccttcccggcctgccgaagaagaag
tga
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