Paenibacillus donghaensis: B9T62_07090
Help
Entry
B9T62_07090 CDS
T04971
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pdh
Paenibacillus donghaensis
Pathway
pdh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9T62_07090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdh03019
]
B9T62_07090
03009 Ribosome biogenesis [BR:
pdh03009
]
B9T62_07090
Enzymes [BR:
pdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B9T62_07090
Messenger RNA biogenesis [BR:
pdh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9T62_07090
Ribosome biogenesis [BR:
pdh03009
]
Prokaryotic type
rRNA helicases
B9T62_07090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ASA20581
UniProt:
A0A2Z2KKZ3
LinkDB
All DBs
Position
1662727..1664172
Genome browser
AA seq
481 aa
AA seq
DB search
MSELTFKDYGLDEEIVRALETLNYEQPTEVQRKVIPVALKQQDLIVKSQTGSGKTAAFGI
PVCELVDWTENKPQALILTPTRELAAQVSEDITHIGRFKRIKAVALFGKQPFAPQKAELA
QKTHVVVGTPGRVFDHIERGSLTLSRIKYLVIDEADEMLNMGFIEQVEKIIKQLPKDRVT
MLFSATLPEAVKNLCRKYMSGPADIEIEASGITTATIEHALIEVPQAAKFSLLSDIITVE
NPDSCIIFCRTQDQVDALFRGLADLDYPCDKIHGGLMQDERFEVMNAFKRGQFRYLIATD
VAARGIDIENITHVINYDIPLEKESYVHRTGRTARAGKAGKAITFVTPNEQKWVREIEEY
IGFSLPPMKAPSDAAVEHAKAAFEQKINKQPVLKTGKSEIMSQDILKLYFNGGKKKKLRA
VDFVGTLAKLEGMTAADIGIITIQDNVSYVDILNGKGPLVLKAMKETTIKGKLLKVYVAN
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattaacatttaaggattatgggctggatgaagagattgtcagagccctggag
acgctgaattatgagcagccgaccgaggtgcagcgcaaggtgatccctgtagcactgaag
cagcaggatctgatcgtcaaatcgcagaccggcagcggcaagaccgcagcgttcggtatc
ccggtctgtgagctggttgactggacggagaataaaccgcaggcgctgattctgacgcca
acccgggagctggccgcccaggtcagcgaggatattacccatatcggccgcttcaagcgg
atcaaggccgtggccctgttcggcaagcagccgtttgcgccgcagaaggccgagctggca
cagaagacacatgttgtcgtaggtacgcctggacgggtgtttgatcatatcgagcggggt
tcactgacgcttagccggatcaaatatctggtgattgatgaagcggacgagatgctgaac
atgggattcatcgagcaggtggagaagatcatcaagcagctgccgaaggaccgtgtgacg
atgctattctcggcgacgctgccggaggccgtcaagaacctgtgccgcaaatatatgagc
gggccggctgacatcgagattgaagccagcggcatcaccactgcgacgattgagcatgcc
ttaattgaagtgccgcaagctgctaagttctcgctgctgagcgatatcatcacggtggag
aacccggacagctgcattattttttgccggacccaggatcaggtggatgccttgttcaga
gggttggccgatctggactatccatgtgacaaaatccatggcgggttgatgcaggacgag
cgttttgaggtgatgaatgcgttcaagcggggccagttccgttacctgatcgccaccgat
gtggctgccagaggaattgatatcgagaatattacccacgtgatcaattacgatattccg
ctggaaaaagaaagttatgtacaccgcactggcagaacggcccgagcgggcaaagcgggc
aaagcgatcaccttcgtcaccccgaatgagcagaagtgggtccgtgagattgaggagtat
attggcttcagcctgcctccgatgaaggctccgtccgatgcagcagtggagcatgcgaag
gccgcttttgaacagaagatcaacaagcagccggttctcaaaaccggcaagagcgaaatc
atgagccaggacatcctgaagctgtacttcaacgggggcaagaaaaagaagctgcgcgcc
gttgattttgtcggcacgctggccaagctggagggcatgaccgcagcggatatcggaatc
attacgattcaggacaatgtgtcgtatgtcgacatcctgaacggcaaaggcccgctggtg
ctgaaggcaatgaaggaaaccaccatcaagggcaagctgctgaaggtgtatgtcgccaat
aaatag
DBGET
integrated database retrieval system
