Phyllostomus discolor (pale spear-nosed bat): 114488434
Help
Entry
114488434 CDS
T07739
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114488434 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114488434 (CNOT1)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114488434 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114488434 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
114488434
NCBI-ProteinID:
XP_028357934
UniProt:
A0A6J2KXC9
LinkDB
All DBs
Position
12:complement(54308249..54380999)
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLGPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEASNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatctccacattgtcctatgccattgataatccgttgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagctcccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gagcagatagacgcttttcttaagacactgcgcagagatttcccccaggaacgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagagtgtcgcaatataatcatgcagttt
ggtgttcgggaggttacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggaattccactacagagtatctctgctcctggcagtgggatc
tggagtgatgggaaagataaaagtgatggagcacaggcacatacatggaatgtagaagtc
ttgattgatgttctcaaagaactgaacccgagtttgaattttaaggaagtaacttatgaa
cttgaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcaaaggggtctgggtatggaagtgttcccagtagacctaatatatagaccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctactgaggctt
gcagaggtgggacaatatgagcaagtcaaacagctcttcagcttcccgatcaaacactgt
ccggacatgctggtattggccttactgcaaatcaacacctcctggcacaccttgcgccat
gaactcatctccactctgatgccaatattcctcggaaaccatcctaactctgctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggggagcagtacgaccaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttatcgaccttgctgcactggcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaagcatgcatgactttttta
aagagacggtgcccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccagaaactctggcaacaatgttggcctgtttacaagcttgtgcgggg
agtgtttctcaggagttatcagaaaccatcctcaccatggtagccaattgcagtaatgtg
atgaataaggccagacagccaccacctggagttatgccaaaaggtcgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccgcccctttctacccca
aatcaaacaactgcattcagtggtattggaggactttcatcacaacttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggcccttggacttcctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacaaaggtttaaagactctacc
ataaagagggaacgagaagtatttaattgtatgctaaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagaattacatataacagcctgcctgtttggtgggata
attgaaaaaggactggtcacttacatggcactaggcctagccctgagatacgttcttgaa
gccttacgcaagccttttggatccaaaatgtattatttcgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatatcgagtatggacagcaatctagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggcc
caggcccaggcccaagttccagcaaaagcaccccttgctggtcaggttagcactatggta
accacctcgacaaccaccactgttgctaaaacggttactgtcaccaggcctaccggagtc
agctttaagaaagatgtgccaccttctattaatacaacaaatatagatacgttgcttgtg
gccacagaccaaactgaaagaattgtagagcccccagaaaatatccaagagaaaattgct
tttatcttcaacaatctctcacagtcaaatatgacacaaaaggttgaagaactaaaggaa
actgtgaaggaagaattcatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaacttccacagcctgtattcaaacttccttgacacgctgaagaatcctgaa
tttaataagatggttttaaatgagacctacagaaacatcaaagtgttgctgacctctgat
aaagctgcagccaatttctcagatcgttctttgctgaagaacttgggacattggctagga
atgattacactagctaaaaataaacccatcttacatactgacttggatgtaaaatctttg
ctgctagaggcctatgttaaaggacagcaagaattgctctatgtagtgccctttgttgcc
aaagtcttagagtctagtattcgtagtgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacaccaggaacatgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaatgagctaaaacctgga
aacctcctgaaggataaagatcgcctgaagaacttagatgagcagctctctgctccaaag
aaggatgtcaagcagccggaagaacttcctcccatcacaaccacaacaacttctacaaca
ccagctaccagtaccacctgtacagccacagttccaccacagccacagtacagctatcat
gacatcaatgtctattcccttgcaggacttggaccacacattaccctaaacccaacaatt
cccttgtttcaggcccacccacagttgaagcagtgcgtgcgccaagcaattgaacgggct
gtgcaggagttggtccatcctgtagtggatcgatcaattaagatcgccatgactacttgc
gagcaaatagtgaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacttgcagggaacct
ttgctcatgagtatatccaccaacctgaaaaacagttttgcctcagctcttcgtactgca
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggac
aagagattggcaactgaatttgagctgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacataccaagctgagcggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagaatttgcacgcaatgtgcct
ggcttcttgcctacgaatgatttaagtcaacccacaggatttttagctcagcccatgaag
caagcttgggcaacagatgatgtagctcaaatttatgataagtgcattacagaactagag
cagcacctacatgccatcccgccaacgttggccatgaaccctcaagctcaggctcttaga
agtctattggaggttgtagtattatctcgaaactctcgagatgccatagctgctcttgga
ttgctccagaaggctgtagagggcttactagatgccacaagtggtgctgatgctgaccta
ctgctgcgttacagggagtgtcacctcttggtcttaaaagctcttcaggatggccgggca
tatgggtctccatggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggcagtggagttgctgattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaactacatggctgttgca
tttgctatgcaattggtaaaaatcctgctggtggatgagaggagtgttgcccacattact
gaggcagatctgttccacaccattgaaaccctcatgagaattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaagactgatgac
ctcataacaaggttctttcgtttgtgtactgaaatgtgtgttgagatcagttaccgtgct
caggcagagcagcagcacaatcctgctgctaatcccaccatgatccgagccaagtgctac
cacaacctggatgcctttgtccgactcattgcactgctagtgaagcactcaggggaggcc
agcaacactgtcacaaagattaatctgctgaacaaggtccttggtatagtagtgggagtt
ctcctgcaggatcacgatgtccggcaaagtgaattccagcagcttccctaccatcgaata
tttattatgctgctcttggaactcaatgcacctgagcacgtattggaaaccattaatttc
cagacacttacagctttctgcaatacgttccacatcttgaggcctaccaaagctcctggc
tttgtgtatgcctggctcgaattgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaaggggtggcctatgtatgcacagttactgattgatttattcaaa
tacttagcacctttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaag
ggcactttaagagtgctactggttcttctgcatgacttccctgagttcctttgtgattac
cattatggattctgtgatgtgatcccacctaattgtatccagctaagaaatctaatcctg
agtgccttcccaagaaacatgaggctcccagatccattcactcctaatctgaaggtggat
atgttgagtgaaataaacattgcaccccggattctcaccaattttactggagtgatgcca
cctcagtttaaaaaggatttggattcctatcttaaaacgcggtcaccggtcacttttcta
tctgatctgcgcagcaacctacaggtatccaatgagcctggcaatcgctacaacctgcag
ctcatcaatgcactggtgctctatgtcgggactcaggccatcgcgcacatccacaacaag
ggcagcacaccttcaatgagcaccatcacccactccgctcacatggacatattccagaac
ctggctgtggacttggacactgaaggtcggtatctcttcttaaatgcaatagcaaatcag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctatacctttttgca
gaagccaacactgaagctatccaagaacagatcacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtctgcttattaccttcattgagctgattaaaaatcca
gcatttaagttctggaaccatgagtttgtacactgtgccccagaaattgaaaagttgttc
cagtcggtcgcacagtgctgcatgggacagaaacaggctcagcaagttatggaagggacg
ggtgccagttag
DBGET
integrated database retrieval system
