Phyllostomus discolor (pale spear-nosed bat): 114502572
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Entry
114502572 CDS
T07739
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X3
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03018
RNA degradation
pdic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114502572 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
114502572 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114502572 (LSM4)
03041 Spliceosome [BR:
pdic03041
]
114502572 (LSM4)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114502572 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
114502572 (LSM4)
Spliceosome [BR:
pdic03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114502572 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
114502572
NCBI-ProteinID:
XP_028375387
UniProt:
A0A6J2M5X6
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All DBs
Position
8:complement(48687277..48698411)
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AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQTGKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgctcccgttgtcactgctgaagacggctcagaatcaccccatgttggtagagcttaaa
aatggtgagacatacaacgggcaccttgtcagctgcgacaactggatgaacatcaacctg
cgcgaggtgatctgcacgtccagggatggagacaagttctggcggatgccagagtgctac
atccgaggcagcaccatcaagtatctgcgcatccctgacgagatcattgacatggtcaag
gaagaggtggtggccaaaggtcgtggtcgaggtggtctgcagcagcagaagcagcagaaa
ggccgtggcatggggggtgccgggcgaggtgtgtttggcggccggggccgcggcgggatc
ccaggcactggcagaggtcagccggaaaagaagcctggcaggcagacgggcaaacagtga
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integrated database retrieval system
