Paraburkholderia dioscoreae: PDMSB3_0448.1
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Entry
PDMSB3_0448.1 CDS
T08115
Name
(GenBank) RecA-superfamily ATPase possibly involved in signal transduction
KO
K08482
circadian clock protein KaiC
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
PDMSB3_0448.1
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
AAA_16
nSTAND3
AAA_22
IstB_IS21
RecA
AAA_19
GvpD_P-loop
DnaB_C
AAA_14
AAA_7
NPHP3_N
MEDS
AAA_5
PAXNEB
AAA_33
AAA_24
AAA_30
NACHT
AAA_11
SLFN-g3_helicase
CbiA
TrwB_AAD_bind
AAA_18
SRP54
Motif
Other DBs
NCBI-ProteinID:
VVD31751
UniProt:
A0A5Q4ZIF4
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Position
II:complement(477885..479402)
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AA seq
505 aa
AA seq
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MSNRHDADTPARLSSGIEGIDDILGGGLTPHRMYLVEGAPGTGKTTLALQFLLKGVEEGQ
GGLYITLSETRSELIAVAESHGWDISRFTVLELLSDEGLDPQYEQTVLHPAEVELGETVR
NVIQQVEELKPARIVLDSLSELRLLSQNPLRYRRQILALKRYFATRECTVLLLDDNSSDP
GDVQLHSIAHGVISLDNLVHDYGGNRRRARVAKMRGIKFREGYHDFTLDTGGIHVYPRLV
AAEHHTNFNAEVVSTGTAGLDALLGGGLIPGTNALMIGPSGVGKTTTVVSCLIAALERGE
RCVYYVFDETLTTLTIRCATLGMYLAPHVESGLLTLRQIDPAEISPGEFASDVRRSVEKK
GARYVAIDSLNAYLQAMPGERYLLLQMHELLGYLNQQGVVTMLVLGQHGIIGEVQNDIDI
SYLSDVVVLFRYFEHHGEVLTAVTAVKSRANAHERSIRQFRLASGGVEVGDALRDFEGVL
SGLPAYRGSTALLGATNRVIETPGK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacagacacgacgccgacacaccggcccgcctgtcctcaggaatcgagggaatc
gacgacatcctgggaggcggtctcacaccgcaccgcatgtacctcgtggaaggcgcgccc
ggtacaggtaaaactaccctggccttgcagttcttactcaagggtgtcgaagaaggccaa
ggcggcttgtatatcacgctgtccgaaacccgctcagagttgatcgcggtagccgaaagt
catggctgggacatcagccggttcacggttctggagctgctttccgacgaaggcctcgac
ccgcaatacgagcagaccgtcttgcacccggccgaagttgaactcggcgagacggtgcgc
aacgtgatccagcaggtcgaggaactcaagcccgctcgcatcgtgctcgacagcctctct
gaattgaggctgctgtcgcagaacccgctgcgctaccgccggcagattctcgcgctcaag
cgttatttcgccacccgcgaatgcaccgtgctgctgctcgacgacaattcgtccgacccc
ggcgacgtgcagttgcacagcatcgcgcacggcgtgatcagcctcgacaacctcgtgcac
gactatggcggcaaccgccgccgcgcacgcgtcgccaagatgcgcggcatcaagttccgc
gagggctaccacgacttcacgctcgacaccggcggcatccacgtctatccgcgcctcgtc
gcggccgagcatcacaccaacttcaacgccgaggtggtgagcaccggcacggcgggactc
gacgcgctgctcggcggcggactgatccccggcaccaacgcgctgatgatcggcccctcg
ggtgtgggcaagaccaccacggtggtgtcatgcctgatcgcggcgctcgaacgcggcgag
cgttgcgtctactacgtgttcgacgagaccctcaccacgctgacgatccgttgtgcgacg
ctcggcatgtatctcgcgccgcacgtcgagagcggtttgctgacgctgcgccagatcgat
ccggcggagatatccccgggcgagttcgccagcgacgtgcgccggtcggtcgaaaagaag
ggcgcccggtacgttgcgatcgacagcctgaacgcctatctccaggccatgcccggcgag
cgctatctgctgctgcaaatgcacgagctgctcggctatctcaaccagcaaggcgtcgtc
acgatgctcgtgctggggcagcacggcattatcggcgaggtgcagaacgatatcgacatc
agctatctgagcgacgtggtcgtgctgttccgctatttcgaacaccacggcgaagtgctc
accgccgtgaccgccgtgaagagccgcgccaatgcccacgaacgctcgatccgccagttc
cgtctagccagcggcggcgtggaagtgggcgacgcgctgcgcgacttcgaaggcgtactc
tccggactgccggcttatcgtggcagcactgccctgctcggggcgacgaaccgcgtcatc
gaaacgcccgggaagtga
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