Paraburkholderia dioscoreae: PDMSB3_3043
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Entry
PDMSB3_3043 CDS
T08115
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00071
Fatty acid degradation
pdio00362
Benzoate degradation
pdio00650
Butanoate metabolism
pdio01100
Metabolic pathways
pdio01120
Microbial metabolism in diverse environments
pdio01200
Carbon metabolism
pdio01212
Fatty acid metabolism
Module
pdio_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PDMSB3_3043
09103 Lipid metabolism
00071 Fatty acid degradation
PDMSB3_3043
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PDMSB3_3043
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PDMSB3_3043
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
Pyr_redox
F420_oxidored
NAD_binding_7
DAO
Motif
Other DBs
NCBI-ProteinID:
VVD29499
UniProt:
A0A5Q4ZBL1
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All DBs
Position
I:3122761..3124881
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AA seq
706 aa
AA seq
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MTLNPSADVVTRELRGKVLLVTIDHAPVNALSADVRRGLLAAVEAADADNAVEAVLIVGA
GRNFIAGADIREFGKPPVPPALPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIA
VEGAKLGLPEVQLGLLPGAGGTQRTPRLIGAQAALDLILSGRHASSKEALALGLIDRLGS
SDDILAEGLAYVHELLAAHAPVRRTREAAALGDRAASLAAVTAARAETAKKSRGLFSPLK
IIDAVEAAIEQPFDEGLRLERKLFLECLDSPQRAGLIHAFFAEREVLKAPETRDAKPRAL
NAIGVVGGGTMGAGIAVAALDAGLPVTMIERDDASLARGLAHIEKVYDGLIAKGRMSADK
KAAVMARWNGSTSYDALADADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDI
DAIAASISRPADVIGLHFFSPANIMKLLEVVVPKQVSADVVATAFEFAKNLRKTPVRAGV
CDGFIGNRVLAVYRAAADAMMEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWAARK
RRAATRNPAARYVQIADRLCERGWFGQKTGRGFYLYPEGSRSGTPDPEVEAIIDAERARA
GITPRSFTDDEIIRRYMAAMINEGANVVHERIALRPLDVDVTFLYGYGFPRYRGGPMKYA
DMVGLPKILADIREFAKEDPLFWKASPLLVELVERGADFASLNQTV
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcaacccttcagccgacgttgtgacgcgcgaattgcgcggcaaggtgctgctc
gtgacgatcgaccacgcgccggtcaatgccctctccgccgacgtgcggcgcggtctgctc
gccgccgtcgaagccgcggatgccgataacgcggtggaagccgtgctgatcgtcggcgcg
gggcgcaatttcatcgccggcgcggacattcgcgagttcggcaagccgccggtgccgccc
gcgctcccggacgtatgcaaccgcatcgaagcgtgcacgaaaccggtggtcgccgcgatt
catggcgcggcgctcggcggcggcctggaagtggcactcgcggcgcactaccggattgcc
gtggaaggcgcgaaactcggcctgcccgaagtgcaactcggcctgttgcctggcgcgggc
ggcacgcagcgcacgccgcgcctgatcggcgcgcaggccgcgctcgacctgatcctgagc
ggccgccatgcgagctcgaaggaagcgctggcgctcggtctgatcgaccgcctgggcagc
agcgacgacatcctcgccgaaggactcgcgtatgtacacgagttgctggccgcccacgcg
ccggtgcgccgcacccgcgaggccgcagcgctcggcgaccgcgccgcgagcctcgccgcc
gtaaccgcagcgcgcgcggaaaccgcgaagaaatcgcgtggcctgttctcgccgctgaaa
attatcgacgccgtcgaggccgccatcgaacagcctttcgacgaaggtctgcggctcgaa
cgcaagctgttcctcgaatgcctcgacagcccgcagcgcgccggcctgatccatgcgttc
tttgccgagcgcgaagtgctcaaggcgcccgaaacacgcgacgccaaaccgcgcgcgctg
aacgcgatcggcgtggtgggcggcggcacgatgggcgcgggcatcgcggtcgcggcgctc
gacgcgggcctgccggtgacgatgatcgaacgcgatgacgcctcgcttgcgcgcggcctc
gcacacatcgagaaagtctacgatggcctgatcgccaagggccgcatgagtgcggacaag
aaagcggccgtcatggcgcgctggaacggcagcacctcttacgatgcgctcgccgatgcc
gatctcgtgatcgaagccgtgttcgaagacctcgccgtcaaacaggccgtattcgccgaa
ctcgatcgcgtctgcaaagcaggcgccgtgctcgcaaccaacacgtcatatctcgacatc
gacgcgatcgcggcgagcatttcgcgccccgccgacgtgatcggcctgcacttcttctcg
cccgccaacatcatgaagctgctggaagtggtcgtgccgaaacaggtcagcgcggacgta
gtcgccaccgcgttcgagttcgcgaaaaatttgcgtaaaacgccggtgcgcgcgggcgtg
tgcgatggcttcatcggcaaccgggtgctggccgtgtaccgcgccgccgcggatgccatg
atggaagacggcgcctcgccctatcagatcgatgcggccgtgcgcgcgttcggctttccg
atgggaccgttccaggtggtggatctggcgggcggcgacatcggctgggcggcacgcaag
cggcgcgccgccacccgcaatcccgcagcacgttacgtgcagatcgccgatcgcctgtgc
gagcgcggctggttcggccagaaaaccggacgcggcttttatctgtaccccgaaggatcg
cgcagcggcacacccgaccccgaagtggaagcgatcatcgacgccgagcgcgcacgcgcc
ggcatcacgccgcgtagtttcaccgacgacgagatcatccgccgctatatggccgcgatg
atcaacgaaggcgccaacgtcgtgcacgagcgtatcgcgctgcgtccgctggatgtcgac
gtgacgttcctgtacggctatggctttccgcgctatcgcggcggtccgatgaaatacgcg
gacatggtcggcctgccgaagattcttgccgacatccgcgagttcgccaaagaggatccg
ctcttctggaaggcctcgccgctgctcgtggaactggtggaacgcggcgccgatttcgcg
agcctgaaccagacggtctga
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