Pseudoalteromonas donghaensis: D0907_02230
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Entry
D0907_02230 CDS
T05890
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
pdj
Pseudoalteromonas donghaensis
Pathway
pdj00730
Thiamine metabolism
pdj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D0907_02230 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdj03009
]
D0907_02230 (rsgA)
Enzymes [BR:
pdj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
D0907_02230 (rsgA)
Ribosome biogenesis [BR:
pdj03009
]
Prokaryotic type
GTPases
D0907_02230 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
GTP_EFTU
FeoB_N
MMR_HSR1
MMR_HSR1_Xtn
Septin
AAA_29
AIG1
AAA_16
AAA_22
ABC_tran
AAA_7
AAA_24
Roc
Motif
Other DBs
NCBI-ProteinID:
AXV64172
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All DBs
Position
complement(483567..484625)
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AA seq
352 aa
AA seq
DB search
MAKQKKLSKGQSRRIKANHQKRLSNADKKQDKGAAVQWQNDNLGPAENAVVLSRFGQHAD
IETDSGDVLRCNIRRTVSSLVCGDEVIFRRAKVSEGDLAGVIEATHERRSQLTRPDFYDG
VKVVAANIDQILMVSAVLPEFTPNIIDRYLVACEDMGIEPILVLNKIDLIDDEGLAYINE
ILDIYRELGYQVLLVSNKTGQGIDELKQTLIDKNSIFVGQSGVGKSTLVNTVLPDAAILT
QEVSENSGLGQHTTTVSRLHHLPSGGNLIDSPGIREFGLWHLDVERVTWCFKEFRDFIGG
CRFRDCKHLNDPGCIIRQAVDDGDISELRFDSYHRILETMADGRAGARAPRV
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacaaaagaaattaagtaaaggccagtctcgtcggattaaggccaatcatcaa
aaacgtttgtctaatgctgataaaaagcaagacaagggcgcagccgtgcaatggcaaaac
gacaatttaggccctgctgaaaatgccgttgtattaagccgttttggacaacatgcagat
atcgaaacggactctggtgatgtgctgcgctgtaacattcgtcgcactgtatcaagcctt
gtttgcggggatgaagtgatatttcgtcgcgccaaagtgagtgagggtgacttagccggt
gtcatcgaagcaactcacgaacgtcgctcgcagcttacacgtccagatttttatgacgga
gtgaaagtcgttgcagctaatatcgaccaaattttaatggtgtcagcggtattacctgag
tttactcctaacattatcgaccgttatttagttgcctgtgaagacatgggcatagagccg
attttagtgctcaacaaaatcgatttaattgacgatgaaggactcgcctatattaatgaa
attctcgatatttatcgtgaactgggctatcaagtattactcgtcagtaataaaacgggc
caaggtattgatgagcttaaacaaacgttaatagataaaaacagcatctttgtgggtcaa
agtggtgtgggtaaatcaacattagttaatactgttttacccgacgccgctattttaact
caggaagtctctgaaaatagtggtcttgggcaacacacaacaaccgtatcacgtttacat
cacttaccctctggcggtaaccttattgattcaccagggatccgtgagtttggcctatgg
catttagatgttgaacgcgtaacttggtgctttaaagagttccgtgactttattggcggc
tgtcgttttcgtgactgtaaacatctaaatgatccgggctgtatcattcgccaagcggtt
gatgatggagatatttcagaacttcgttttgacagttaccaccgaattttagaaactatg
gccgatggccgtgcgggtgcacgcgctcctcgcgtataa
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