Pseudomonas aeruginosa DK2: PADK2_29575
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Entry
PADK2_29575 CDS
T02161
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pdk
Pseudomonas aeruginosa DK2
Brite
KEGG Orthology (KO) [BR:
pdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdk03016
]
PADK2_29575 (trmE)
Transfer RNA biogenesis [BR:
pdk03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PADK2_29575 (trmE)
Prokaryotic type
Methyltransferases
PADK2_29575 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
Ras
ABC_tran
AAA_28
ABC_ATPase
DUF4702
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFM68176
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Position
complement(6398644..6400011)
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AA seq
455 aa
AA seq
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MQAATETIVAIATAQGRGGVGIVRVSGPLAGQMAVAVSGRQLKARHAHYGPFLDAGGQVI
DEGLSLYFPGPNSFTGEDVLELQGHGGPVVLDLLVQRCLELGARQARPGEFSERAFLNDK
LDLAQAEAIADLIEASSEQAARNALRSLQGEFSRRVHALTEQLISLRIYVEAAIDFPEEE
IDFLADGHVLGLLEKVRTELSTVQREASQGALLRDGMTVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHVVDTAGLRDTEDHVEKIGVERALKAIGEADRVL
LVVDATAPEAADPFSLWPEFLDQRPEPGKVTLIRNKADLSTESIGLEESADGHVTITLSA
RTGAGLELLREHLKACMGFEQTAESGFSARRRHLEALRLAGQALEHGHSQLIHNGAGELL
AEDLRQAQQHLGEITGAFTPDDLLGRIFSSFCIGK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgccaccgaaaccatcgtcgcgatcgctaccgcccagggccgcggcggcgtg
ggaatcgtccgcgtctccggacctctcgccggacagatggccgtggccgtgagcggacgc
cagctgaaagcccggcatgcgcattacggaccgttcctcgatgctggtgggcaggtgatc
gacgaaggcctgtcactgtatttcccaggcccgaactcgttcaccggcgaagacgtactc
gaactgcaggggcacggcggccccgtggtactcgacctgctggtgcagcgttgtctggaa
ctgggcgcccgccaggcgcgaccgggcgagttcagcgagcgcgcgttcctcaacgacaag
ctcgacctggcccaggccgaagccatcgccgatctgatcgaggccagctcggagcaggcc
gcgcgcaatgcattgcgttccctgcagggcgaattctcgcgccgggtacatgcattgacc
gagcaactgatttccctgcgcatctatgtcgaagccgccatcgacttccccgaggaagaa
atcgacttcctcgccgatggccatgtactggggcttctggaaaaagtacgcacagaatta
tccacagtgcagcgcgaagcttcccaaggcgccctgctgcgcgacggcatgaccgtggtc
atcgccggacgaccgaatgccggcaagtccagcctgctgaatgccctggccggtcgcgag
gcggccatcgtcacggacatagccggcaccacccgcgatgtactgcgcgaacatatccac
atcgatggcatgcccctgcatgtggtggacaccgcaggcctgcgggataccgaggaccat
gtggaaaagatcggcgtggaacgtgcgctgaaagccatcggcgaagccgatcgcgtgctg
ctggtggtggacgccaccgccccggaagcagcagacccgttttccctatggccggagttc
ctcgaccagcgaccggaaccgggcaaggtcaccctgatccgcaacaaggcggatttgtcc
acagagtccattggcctcgaggaaagcgcggacggccacgtcaccatcaccctctcggcg
cgcaccggcgccggcctggagctgctgcgcgaacacctgaaggcctgcatgggcttcgaa
cagaccgcagaaagcggtttcagcgcccgccggcgccacttggaagcgctacgcctggca
gggcaggcgctggagcatggccacagccaacttatccacaatggcgccggcgaactgctg
gccgaggatctgcgccaggcccagcagcacctgggcgaaatcaccggcgcattcaccccc
gacgacctgctgggtcgcatcttctcgagtttctgcatcggcaagtaa
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