Penicillium digitatum: PDIP_15600
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Entry
PDIP_15600 CDS
T04849
Name
(RefSeq) TFIIH and nucleotide excision repair factor 3 complexes subunit (Tfb2), putative
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pdp
Penicillium digitatum
Pathway
pdp03022
Basal transcription factors
pdp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PDIP_15600
09124 Replication and repair
03420 Nucleotide excision repair
PDIP_15600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_15600
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_15600
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PDIP_15600
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PDIP_15600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
26229883
NCBI-ProteinID:
XP_014537729
UniProt:
K9H5X6
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MITNPFAASLRQALMGAEDSHSFGVFSQAPEHTLTSIADLDEYARRQWEGVMGYMVGTSA
LSGQRDAVNLSKGVKQLLQAGHLVEIRGNRVDITKDGFGFVLQDVNTQVWHILILYVESA
EAIGMDSVEVLSFLFLLSSLELGSSYDKSHMTSNQLRTLADLADFGIVYQEDADATHFYP
TRLATTLTSDSSALSNPVTGSLTGPVGPSGGSGSGFIIIETNYRLYAYTSSPLQISLISL
FTNLKYRFPNLVTGKITRQSVRRAIEMGITADQIISYLLSHAHPQLRKHSAAQSNGKGIP
ASVLPPTVTDQIRLWQLERDRLRATAGFLFKDFTSLAEYQAPCQYAAEIGVLVWKSDRKR
MFFVTRHEQVAAFLRSQKVGGR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaacccattcgctgcttcgcttcgacaagctctgatgggtgccgaggactct
cactctttcggcgtattctctcaagccccggaacacaccctgacctcgatcgcggatttg
gacgaatatgctaggcgacagtgggaaggtgttatggggtacatggtcggaacgagtgcc
ttgagtgggcagcgcgacgcggtcaatttgagcaagggtgtcaaacagcttctccaagcc
ggacacctagttgagatccgaggcaaccgtgttgacatcaccaaagatgggtttggattt
gtgctccaggacgtcaacacccaggtctggcacatcttgattctttatgtggagagcgcc
gaggccatcggcatggacagcgtcgaggtcctctcgttcctgttcctcctaagcagcctg
gaactcggatcctcttacgacaagagccacatgacatccaaccaactccgcactctcgcg
gacctcgctgattttggtattgtctaccaagaagacgccgacgcgacgcacttctatccc
acccgtctcgcaactacccttacatcggactcgagcgctctgagcaaccctgtcacaggc
tctcttactgggccagtggggccgtctggtggctctggctctgggtttatcatcatcgaa
actaactaccgactctacgcctacacctcatcgcccctacaaatatccctcatctccctc
ttcacaaacctcaaataccgcttccccaatctggtcactggcaaaatcaccagacagtct
gtccgtcgagctatcgagatgggaatcactgccgatcaaataatctcgtacctattatcg
cacgcccacccacagctgcggaaacacagcgctgcccaatccaacggcaagggtatcccg
gcatctgtgctcccgcctactgtgacagatcagatcaggctttggcagctagagcgggat
cgtctccgggccacggcgggctttttgttcaaggatttcacgagcttggccgaatatcag
gccccttgccagtatgccgcggaaattggtgtactggtttggaagtcagatcggaagcgc
atgttctttgtcacaaggcatgagcaggtggctgcatttttgcgcagtcagaaggtaggt
gggaggtaa
DBGET
integrated database retrieval system