Penicillium digitatum: PDIP_19900
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Entry
PDIP_19900 CDS
T04849
Name
(RefSeq) hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
pdp
Penicillium digitatum
Pathway
pdp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PDIP_19900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_19900
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PDIP_19900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_26
PH
PH_9
Pept_tRNA_hydro
Motif
Other DBs
NCBI-GeneID:
26230313
NCBI-ProteinID:
XP_014537166
UniProt:
K9GGH3
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MGRSRGKSILSGLGGSKHNATAKENKKSSSDVTLVANLSPFDTPHQWQTPPTTPSPPTDT
SPGSSGLRVGNGSRPASMIFSRNPPLMQQAVDTPPELSPIFSFLNIHSNKVYQEGYFLKL
NDLDSHGRPSGDRQWVECYAQLVGTVLSLWDGAALDAAGGEEVPATFINLADASIKMIET
LPIQNGATQPLKNVLSLSSAGKNRYLLHFNSFNSLTQWTAAIRLSMFEHTSLYEAYTGSL
IAARGRTLNGINSILAPTKFKYEDWARVRFGAGTPWRRCWFVICPPDEKELQKARKVIKK
SAYDRLTMPVTGNIKFFETKKTKKAIPIATVTQVYSAYAIYPQSKALIDASTLVKLEGRI
TTHAPDSSSEGLVFIMPELHPAVSGLEMMLRFLFPTFDTFNLYGRPTRLVADTNHIKSIM
FAFPKERRYGYLDVLDIANLLQTPGSQEWSEAEWRKQLKEATQRRISSGRSRTNSFNSSR
PLYRSVSSRHSDAPMDSTRRQFAGLEKNPEFNHSTEAIIHEVPQNEGSPVMYHNRGVTDT
PGLNIGSRPDHGSFVESTPDSSSPDLMRRGVPTVAPIAESTSSGNDPHLDYLQCPPVRMQ
LPPKTPPAPVEKPPAFSHGPKEVPTYRPDPSSEQRLANNRMSYATLSQLTSVGTMGLSAA
AAGAAWKSHQAQTQNHQQPQDRSFNTVPPPVPVLSINSLAVSSSDEGLGLAPPVRPPPVP
EHCPNTPSTTGSPQCVSPQNYSPQQMQIDTDRFVRRKPLPQQNLFGTEPQSPSEPSYDDL
RHTLDEDALNKIAPHLPSPTSSAGKGNGNEDESNYDDASTDSPDYASTHESVYSKKSVAS
TKPRMGVMKTVGVPTVKDYVIGDAHYTTDHASTSNPDIPTVDFGPTMTYMPTTGRPTTSD
TLRRPLHDRNDSLGTKFSVPTQTIDQANGRPSSGEEYRRSMLWQPGMASGRPVTPGGGLT
PEQFVQQRAAPSPPMHFHNRSPSNPMSVHRPVSGDWTQHARPRSPTNPQRDATYRPLSRG
AQGMLTYNEGSANLSAREQEHVARMTGSSFFNMSNDNQKPQAPVNPMGLVSHIDTREREK
REMREGMSNQAVQQAIAHRQQHMMQQQYAPTFLPPFAPQQMQSQQAGFVYPPQHGRHESM
YNMPTASHTWDALNQAVHPAEPRRSSWYGQLAQAPQTPPSYPQHQTYGQESRYYTHAN
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgttcgcgtggtaagtcgatcctctccggtttggggggatcgaagcacaatgcc
actgctaaagaaaataaaaagtcgtcgagcgacgtgaccctagtggccaacttgagtcca
tttgatacaccacaccagtggcaaactccgcctactaccccgtctcctccgaccgataca
tcccctgggagttctggactacgagtcggaaatggctcacggccggcatccatgatcttc
tcacgcaacccgcctctcatgcaacaggcggtcgataccccgccggagttgtcgccaatc
ttttcattccttaatatccactcgaacaaggtctaccaggaaggttactttttaaaattg
aatgatctggattcgcacggacggccttctggggatcggcaatgggtggaatgctacgca
cagttggtcggaactgttctttcactatgggatggcgctgcgctggacgcagcaggtggt
gaagaggtcccggcgacctttattaatttggctgatgcgtcgatcaagatgattgagact
cttccgatccaaaatggagctacacaaccattgaagaacgtacttagcctgtcttctgcg
ggcaaaaatcgatacctcttacatttcaattcatttaactcgctgacacaatggactgcg
gcgattcgtctctcgatgttcgaacacacgtctttatatgaagcgtacactggttctctg
atcgcagcgagaggacgaactctcaacggaatcaactcgattctggcgcccaccaaattc
aagtatgaagattgggcgcgggtgcgatttggagcaggaactccgtggagacggtgctgg
tttgtgatctgtccgccagacgaaaaagagctccagaaagctcgaaaagtcataaaaaaa
tcggcatatgaccgcttgacaatgccagttaccggaaatatcaagtttttcgagacgaaa
aagacgaaaaaggcgattcccattgcaacggttactcaggtgtactcggcatatgctatt
tacccacaatctaaagcgctcattgatgcatccaccctggtgaaattggaaggacggatt
accacccatgcgcctgactcttcctcagagggtcttgtatttatcatgccagagctgcat
cctgccgtctcgggactcgagatgatgctgcgcttccttttcccgacattcgacactttc
aatctctatggccgtcctactcgcctggtggcagacactaatcacattaagagcatcatg
tttgccttccctaaggagcgacgctacggttatcttgatgtgctggacattgccaatctt
ctccaaaccccagggagccaagaatggagcgaagcggaatggagaaaacagctcaaagag
gcaacccagcgccggatatcatctggcaggagcagaaccaacagtttcaacagctcaaga
cctctttatcgctcggtgtccagccgacacagtgacgcccctatggactctactcgccgc
cagtttgccggtctggagaagaatccggaattcaaccactcgaccgaggctattattcat
gaagtcccccaaaacgagggctcacccgtgatgtatcacaaccggggggttactgatacc
ccgggcttaaacattggttctcgcccagaccatggatcgttcgttgagagcacacctgac
tcatcctctccagatctgatgcgtcgtggcgttccaacggtcgctccgatcgccgagagt
accagctctggcaacgacccgcatctcgattatcttcaatgcccgccagtcagaatgcag
cttccccccaaaacgccaccggctcctgttgaaaaaccacccgccttttcgcatggacct
aaagaggtgcccacctaccggcccgatccctcttcggagcagaggttggcgaacaaccgg
atgtcttacgcaacgctttcccaactcacatcggtgggcacgatgggactgagcgcggca
gccgccggtgctgcatggaaaagccaccaggcacagactcagaaccaccaacagccccag
gacaggagcttcaatactgtcccccctccggtccccgttctgtccataaactctcttgca
gtttcatcaagtgatgaaggcttgggccttgcacccccggttcgacctcccccggttccg
gagcattgccctaacacacctagtactaccggcagcccacaatgtgtttctccccagaac
tattcccctcaacagatgcagattgacaccgacagattcgtgcgacgcaagccactccct
caacaaaacctcttcgggacggagccacagtcaccaagcgaaccgagttacgacgatctt
cgtcacacccttgatgaagatgcgttgaacaaaattgctcctcatcttccatccccaact
tcttctgctggaaaaggtaacgggaatgaggacgagagcaactatgatgatgcatcgacg
gattcgcctgactatgccagcacccacgaatctgtctacagcaagaaatccgttgcgtcc
accaaacccagaatgggtgtcatgaagaccgtgggagtaccaacagtcaaggattatgtc
attggcgatgctcattataccacggatcacgcctcaacctcgaatccggatattcccact
gttgacttcggcccaactatgacctacatgcctaccaccgggcgaccaaccacctccgac
accctaagaagacctttgcatgaccgcaatgattcgttgggaaccaaattttctgtgcct
actcaaacaatcgatcaggctaatggccggccttccagcggggaggaatatcgacggagc
atgctgtggcagcctggaatggcttccgggcggcctgtcaccccaggtggaggtcttact
ccggagcagttcgtgcagcaacgggcggcccccagtcctccgatgcatttccacaaccgc
agcccttctaaccctatgtcagtgcatcgcccggtatctggcgactggacccagcatgcc
cgtcctagatcgcccacgaatcctcagcgggatgccacatatcgacctttgtctcgtggt
gcccagggaatgcttacctacaacgagggctcggccaatctttccgctcgtgaacaggag
cacgttgcccgcatgactggttcttccttcttcaatatgtcaaatgacaaccagaaaccg
caggcgccagtaaaccctatgggccttgtctcacatattgatactagggagcgtgaaaag
cgtgaaatgagggagggcatgtcgaaccaggcggtccaacaggccattgcgcaccgtcag
caacacatgatgcagcaacagtacgcgccgacattcttgccgccattcgctcctcaacaa
atgcagtcccagcaagctggctttgtgtatccacctcaacatggtcgccatgagtccatg
tacaacatgccgactgccagtcacacttgggatgccctcaaccaggcggtgcaccccgca
gaaccccgtagatcatcatggtacgggcaactggcgcaggctccgcaaacaccgcctagc
tatccgcaacaccagacctacggtcaagaatcgaggtactacacccatgctaactag
DBGET
integrated database retrieval system
