KEGG   Penicillium digitatum: PDIP_78890
Entry
PDIP_78890        CDS       T04849                                 
Name
(RefSeq) Splicing factor 3B subunit 1, putative
  KO
K12828  splicing factor 3B subunit 1
Organism
pdp  Penicillium digitatum
Pathway
pdp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PDIP_78890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdp03041]
    PDIP_78890
   03036 Chromosome and associated proteins [BR:pdp03036]
    PDIP_78890
Spliceosome [BR:pdp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PDIP_78890
 Complex B
    PDIP_78890
 Complex C
   U2 SnRNP specific factors
    PDIP_78890
Chromosome and associated proteins [BR:pdp03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    PDIP_78890
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT HEAT_EZ TOR1L1_N HEAT_2 TPR_DNAAF5 HEAT_EF3_N TPR_IPO5 HEAT_MROH2B_C GNC1_N Htt_N-HEAT_1 Adaptin_N XMAP215_CLASP_TOG
Other DBs
NCBI-GeneID: 26236205
NCBI-ProteinID: XP_014532046
UniProt: K9FE71
LinkDB
Position
Unknown
AA seq 1227 aa
MSDGRFSQALPSGHMLIPTVADIEAVRRLQAERNAAAASKKGSKTFDQSSQRTDTSTKAS
LTESFDTFLYERDGAAKFSGYDTSIAVDGDEEMEEADGGHRLVGQYTATRSQIDEMARGT
GVEEEDILLGREKAARIADRETDYQKRRFNRGALTPTRADPFAANANVEGESQTYREVMA
IRELDREEERVQKLIAEKREKGEDVTEHQATLKMVEHDKENTEVGSTVTATTDKKRKNRW
GEPAAELGKRSRFDEAPAPAEAPKTGRSRWDLAPSLTAATPVGNQGLATPMHPSQAGAAT
PAVGFGDLPGQVVGWSDEELDIMLPGEADGYKVLDPPPGYEPIRTQARRLMATPAPMSSA
GGVGGFMMQEPESVQSVGKDLPTDIPGVGELQFFKAEDMAYFGKLMEGGDETSMTVEEMK
ERKIMRLLLKIKNGTPPMRKTALRQITDNARDFGPGALFNQILPLLMERTLEDQERHLLV
KVIDRILYKLDDLVRPYVHKILVVIEPLLIDQDYYARVEGREIISNLAKAAGLATMISTM
RPDIDHADEYVRNTTARAFAVVASALGIPALLPFLRAVCRSKKSWQARHTGVKIVQHIPI
LMGCAILPHLKELVGCVSGNLSDEQAKVRTVTALSLASLAEAANPYGIESFDDILSPLWT
GARKQRGKGLSAFLKAVGYIIPLMDEEYANYYTTQIMEILIREFASPDEEMKKVVLKVVS
QCASTPGVTASYLKEHVLADFFKGFWMRRMALDRRNYRQVVDTTVDLGQKVGVGEILERI
VNNLKDESEPYRKMTVETVEKLIASLGAADISERLEERLIDGVLFAFQEQSIEDLVILNG
FGTVVNALGTRCKAYIPQIVSTILWRLNNKSPTVRQQAADLISRVALVMKQCDEEALMGK
LGIVLYEYLGEEYPEVLGSILGALRAIVTVVGITQMQPPIRDLLPRLTPILRNRHEKVQE
NTIDLVGRIADRGPESVNAREWMRICFELMDMLKAHKKGIRRAANNTFGFIAKAIGPQDV
LAALLGNLRVQERQSRVCTAVAIGIVAETCAPFTVLPALMNEYRVPDLNVQNGVLKALSF
LFEYIGEMGKDYVYAVTPLLEDALVDRDQVHRQTAASAVKHVALGVIGLGCEDAMVHLLN
LLFPNIFETSPHVIDRVIEAIEAIRMAVGTGIVMNYVWAGLFHPARKVRMPYWRLYNDAY
VQGADAMIPYYPDMEGDVDRPELSIII
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgtctgacggtcggttttcgcaagctctcccatctggccatatgctgatccccactgta
gccgatatcgaggccgttcgacggctccaagctgagcgcaatgctgctgctgctagtaaa
aagggctctaagacgtttgaccaatcttctcagcgcactgatacctcgaccaaagcctcc
ctgacagaatccttcgacacctttttatacgaacgggatggagcagcgaagttctcgggc
tacgacacttcgatcgctgttgatggcgacgaagaaatggaagaagcggatggcggacac
agactggttggtcaatacactgccaccagaagccagattgatgagatggcgcgaggaact
ggggttgaggaggaggacattttgctaggtcgtgagaaggcagcgcgaattgcagaccgc
gagacagactatcaaaaacgccgattcaaccgtggcgccttgaccccgacgcgcgccgat
cccttcgctgccaatgcgaacgttgaaggagaaagtcaaacctaccgggaagtcatggcc
atccgcgagttggacagggaagaagagcgcgttcaaaagctgatcgcagagaaacgcgag
aaaggtgaagacgttacagagcaccaggctacgctgaagatggtggaacacgacaaagaa
aacaccgaggtaggctcgaccgttacggcgactaccgacaaaaagcgaaagaaccgatgg
ggagagcctgctgccgagctaggcaagagatcgcgtttcgatgaggcacctgctccagca
gaagcccccaaaaccggccgatcgagatgggatctagccccatctctcacagctgccact
cccgtcggcaaccaaggactcgctactcctatgcatccatcccaagcaggtgccgccaca
cctgcagttggcttcggggatctgcccggtcaagttgttggctggtccgatgaagagctc
gatatcatgcttcccggtgaagccgatggctataaggtcctagaccctcctccaggctat
gaacccatccgaacccaggcccgcaggcttatggccacgccagcacctatgtctagcgct
ggtggtgtcggagggtttatgatgcaagagccagaaagtgttcagtctgtaggaaaggac
cttccaactgatattcccggtgtgggtgaacttcaattcttcaaggcggaggacatggcc
tatttcggtaaactaatggagggtggggatgaaaccagcatgaccgtggaagaaatgaag
gagcgaaagattatgagattactgctcaagattaagaacggcaccccgcccatgcgcaag
actgctctgcgtcaaatcaccgacaatgcacgcgactttggtcccggggctcttttcaat
cagattctccctttgctcatggaaaggactctggaagatcaggagcgccatttgctagtg
aaggtcatcgaccgaatcctctacaaactggatgatctggtccgtccctacgttcataag
attttggtcgtcatcgaaccactgctcattgatcaagactactatgctcgtgttgaaggc
cgagagatcatctctaaccttgccaaggccgccggtcttgctacaatgatcagtacgatg
cgtcctgatattgaccacgctgatgaatacgtgcgaaacacgacagcacgcgcttttgcc
gttgtggcctctgccctcggtattcccgccctcctccctttcctccgcgctgtctgccgc
agtaagaagtcatggcaggcccgacacactggtgttaagattgttcagcatatccctatt
ctcatgggttgcgccattcttcctcatctcaaggagttagttggctgcgtttcaggcaac
ctcagtgatgaacaagctaaggttcgtacagtcactgctctatccctggcctctttggcg
gaggctgcgaacccatatggtatcgaaagttttgatgacatcttgagccctctctggacc
ggtgcccgcaagcagcgtggaaagggtctctctgcgttcctcaaggctgtcggctatatt
attcctttgatggacgaagaatatgccaactactacaccactcaaatcatggagatcctg
attcgagaattcgcctcaccagatgaggaaatgaagaaggtcgtgttgaaggtggtttct
caatgtgcaagcactccaggtgtgactgccagctacttgaaggagcacgtcttggcagat
ttcttcaagggcttctggatgcgacgaatggcgctcgatcgacgaaattaccgccaggta
gtcgataccacagtggacctgggccagaaagtgggtgttggcgagattctcgaacgcatc
gtcaataatctgaaggacgaaagcgagccatatcgcaagatgactgtggaaacggtcgaa
aagttgatcgcatcacttggagccgctgatatttccgagaggctggaagaacgcctcatt
gatggtgtcctcttcgccttccaggaacaaagcatcgaagaccttgtcattcttaatggg
ttcggcacagtggtgaacgcacttggcacacgatgcaaggcatatattcctcaaattgtc
agtactattctctggcgtctgaacaacaaatcccccactgttcggcaacaggcagccgat
cttatctcccgcgttgcgctggtgatgaagcagtgtgacgaggaagcgctcatgggcaag
cttggtatcgtgctctacgaatacctgggtgaagaatatcccgaggttttgggctcgatc
ttgggtgctttgcgtgccatcgtcaccgtggtcggtatcacccagatgcagccaccaatc
cgcgatcttcttccccgtcttacacccattctgcgcaaccgtcacgaaaaggtgcaggag
aacaccatcgatctcgtcggtcgtattgccgatcgtggtcccgagtccgtaaacgcccgt
gaatggatgcgtatctgctttgagctgatggatatgctcaaggctcacaagaagggaatt
cgtcgtgcggccaacaacacattcggtttcattgccaaagctattggtcctcaggatgtc
ctagccgctcttctcggcaacttgcgagtacaagagcgtcagtcgcgtgtttgcacagcc
gtcgccattggtatcgtggcggaaacctgtgctccattcactgtgctcccggcgctgatg
aacgagtaccgggtgcccgatctcaacgtgcaaaacggtgtgctcaaggccttgtccttc
ttattcgagtacattggcgagatgggcaaggactatgtctacgctgtcacaccgctgcta
gaggatgcacttgtcgaccgtgaccaagtccaccgacagaccgctgccagcgcggttaag
cacgtcgcactcggtgtcatcggtcttggatgtgaggacgctatggtccatctgctcaac
cttcttttccccaacatcttcgagacgagtccccacgtcatcgatcgcgtcatcgaggcg
attgaagccatccggatggctgtcggcactggcatcgttatgaactacgtttgggctggc
ttattccaccctgctcggaaggtccgcatgccttactggagactgtataacgatgcatac
gtccagggagccgatgcgatgattccttactacccggacatggagggtgacgtggaccgg
cccgagctatccatcataatctaa

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