Polynucleobacter duraquae: CL55_00013060
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Entry
CL55_00013060 CDS
T04207
Name
(GenBank) Anaerobic dehydrogenase, typically selenocysteine-containing
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq00630
Glyoxylate and dicarboxylate metabolism
pdq00680
Methane metabolism
pdq01100
Metabolic pathways
pdq01120
Microbial metabolism in diverse environments
pdq01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CL55_00013060
09102 Energy metabolism
00680 Methane metabolism
CL55_00013060
Enzymes [BR:
pdq01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
CL55_00013060
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Ribosomal_S27
Motif
Other DBs
NCBI-ProteinID:
AKD25639
UniProt:
A0A0E3V0W6
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All DBs
Position
complement(1264490..1267474)
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AA seq
994 aa
AA seq
DB search
MSLTRKSTTSQSSRATPASRLIGSLSRGLQSAVPTMDRRTFLKRSGVGVGAGIAASQLSF
VQKAVAEPNRAMLDGKGKIEVKRTVCSHCSVGCSTDATVENGVWVRQDSNFDSPINMGAY
CAKGASLREHGHGEFRLRYPMKLVDGKYQKISWDQALTEITAQMKDLRTKYSPDSLFFIG
SSKQSNEQAYLLRKWVSFFGTNNTDHQARICHSTTVAGVANTWGYGAMTNSYNDMMNSKA
AMYIGSNAAEAHPVSMLSLLNAKENGCKVVVVDPRYTRTAAKSDQYVRIRSGTDIPFLFG
VLYHIFNNGWEDKKYINDRVYGMDEIRKEVMEKWSPKNVEEACGVPEAEVYKVAETLAKN
RPSTVVWCMGQTQHTIGNAMVRASCILQLALGNVGKSGGGTNIFRGHCNVQGATDVGPNP
DSLPGYYGLAAGSWKHFATVWDVDYEWIKGRYAPDMMEKSGTTVSRWVDAVLEKNDMIDQ
QTAVKGLFFWGHAANSQTRGLDMKRAMDKLDLLVVVDPYPTAVAAMAAMPPAEGNSVNKN
RNVYLLPATTQFETCGSATASNRSVQWREKVIDPLFESVPDHVIMQAFADRLGFGQELSK
NFKMQSSKFAGKQWKEPLIEDILREINRSVWTIGYTGQTPERIKAHMRMAGVFDPKTLKS
RGGVDPVTGYDTTGDYYCLPWPCYGTAAIKHPGSPNLYDTSKSVMEGGGNFRANFGVEKD
GKTLLAEDGSYSKGSAIKTGYPEFDHVLVKKLGWWNQLTEDEQKAAEGKNWKTDLSGGIQ
RVVMKNGCHPFGNAKARAVVWNFPDPIPVHREALYSTNEPMMRKYPTSADKKNFWRLPTL
YKTLQDKNLSDKLYEKFPIILTSGRLVEYEGGGEETRSNPWLAELQQENFVEINPKAAEA
RGIKNWDYVWVKSPTGAKIKVRAMVTERVDQGTAFVPFHFSGWWEGKDLRKYYPEGASPI
ILGESVNTATTYGYDQVTMMQETKTTMCQIEKFA
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgactcgcaaatctactacttcacaaagcagccgcgctacgcctgcatctcgc
ctcattggtagcctttctcgtggactacagtctgcggtaccaacgatggatcgtcgaacc
tttttgaagcgctctggcgttggtgtaggcgcaggtattgcggctagccagcttagcttt
gttcaaaaagcagttgctgagccgaatagagcgatgttagatggcaagggcaagattgaa
gtgaagagaacggtttgttcccactgctcagtaggttgctcaactgacgctactgttgag
aacggcgtttgggttcgccaagattccaattttgattccccaatcaacatgggtgcttat
tgcgccaagggtgcttcactacgtgagcatggtcacggtgaattccgtctccgttaccca
atgaagctcgttgatggcaaatatcaaaagatttcttgggatcaggctttgactgaaatc
actgcgcagatgaaagatctccgtacaaaatatagtcctgattctttgttctttatcggc
tcttccaagcagagcaatgagcaagcctatttgttgcgtaagtgggtttctttctttgga
acaaacaatacagaccaccaagctcgtatttgtcactcaaccacagttgccggtgttgca
aacacctggggctatggtgcaatgaccaatagctacaacgacatgatgaactccaaggct
gccatgtacattggctccaacgcagcggaggctcacccagtatcgatgttaagcctcctc
aatgcgaaggaaaacggctgtaaggttgttgtagttgatccacgctacacaagaacagct
gctaagtctgatcaatatgttcgcattcgttcaggtacagatattccgttcttgttcggc
gttctgtatcacatcttcaacaatggctgggaagataagaaatacatcaacgaccgcgta
tacggcatggatgagatccgcaaagaagtgatggaaaagtggtctcctaagaacgttgaa
gaagcttgcggtgttcctgaggccgaagtttataaagtggctgagacattagcaaagaat
cgtccaagtacagttgtttggtgtatgggtcaaactcagcacaccatcggtaatgccatg
gtgcgtgcctcctgtattttgcagttggcattaggtaacgttggtaagtctggtggcgga
accaatattttccgtggtcactgtaacgttcaaggcgctacagacgtcggtcctaaccca
gattctttacctggctactacggccttgctgccggctcatggaaacactttgccaccgtt
tgggatgttgactacgagtggattaaaggccgctacgcaccagacatgatggagaaatca
ggtactaccgtttctcgttgggtcgatgctgtgctagaaaagaatgacatgattgaccag
caaacagccgttaaaggtttgttcttctggggtcatgcagcaaactctcaaactcgcggc
ttagatatgaagcgcgcgatggacaagttagatttgctcgttgtagttgatccataccca
acagcagtagctgcgatggctgcaatgccgcctgcggaaggtaactcagttaacaagaac
cgtaacgtatacctcttgccagctacaacccaatttgaaacttgtggatcagcaactgca
tcgaatcgttcggttcagtggcgcgagaaagttatcgatccattgttcgaatctgtacct
gaccacgtcatcatgcaagcctttgctgatcgccttggtttcggccaagagctttccaag
aatttcaagatgcagagctccaagtttgctggtaagcaatggaaagagccgctgattgaa
gatatcctcagagaaattaaccgctctgtttggacgattggttataccggtcaaacacct
gagcgcattaaggcgcacatgagaatggcaggcgtatttgatccaaagacattgaagtcc
cgtggtggtgttgatcctgtcactggttacgatacaactggtgactactattgcttgcct
tggccttgctatggcactgccgctatcaagcatccaggctcaccgaacctttatgacacc
agtaagtctgtgatggagggtggtggtaacttccgcgctaactttggcgttgagaaggat
ggcaagactttgttggctgaagatggctcttactctaagggttctgcaatcaagacgggt
tatccagagtttgaccatgtgctggtgaagaaactcggttggtggaatcagttaaccgaa
gatgagcaaaaagctgctgaaggtaaaaactggaagacagacttgtcaggtggtattcag
cgcgttgtgatgaaaaacggctgtcatccattcggcaatgccaaggcgcgtgctgtagtt
tggaacttccctgatccgattccagtccatcgcgaggctttatatagcactaacgagcca
atgatgcgtaaatacccaacatctgcggataagaagaatttctggcgcttgccaaccctg
tacaaaacgctgcaagacaaaaacttgagcgataagttgtacgagaaattcccaatcatc
ttgacctcaggtcgcttggttgagtatgagggcggcggtgaggaaactcgttctaaccct
tggttggcagagttgcagcaagagaactttgtagaaattaatccaaaagctgctgaagcc
cgcggtattaagaactgggactatgtttgggttaaatcaccaacaggtgccaaaatcaaa
gttcgtgcgatggttacggagcgcgtcgatcaaggaactgcttttgtaccgttccacttc
tctggttggtgggagggcaaagacttgcgtaaatactacccagaaggtgcttcaccaatc
attctcggtgaatcggttaacactgcaactacctacggttatgaccaggtgacgatgatg
caagagaccaaaaccaccatgtgccaaatcgaaaaatttgcctaa
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