Polynucleobacter duraquae: CL55_00017000
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Entry
CL55_00017000 CDS
T04207
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq00900
Terpenoid backbone biosynthesis
pdq01100
Metabolic pathways
pdq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CL55_00017000
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pdq01006
]
CL55_00017000
Enzymes [BR:
pdq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CL55_00017000
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CL55_00017000
Prenyltransferases [BR:
pdq01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CL55_00017000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
TSCPD
Motif
Other DBs
NCBI-ProteinID:
AKD26033
UniProt:
A0A0E3V242
LinkDB
All DBs
Position
complement(1654276..1655178)
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AA seq
300 aa
AA seq
DB search
MNHALSFEDWVRAHGQRTELVLESLLDAANANPVRLHAAMRYAAQGGGKRIRPLLVYAAG
ELGDDSGEEKNNALDSAAFAIECIHAYSLVHDDLPCMDDDDLRRGRPTVHKAYDEATALL
VGDALQTRAFEVLANTQCDGNTRLAMISALASASGSRGMAGGQAIDLESVGKKLDLTGLK
QMHAMKTGALLSCSVQMGGIAAKLNAIQMQHLKNYSEALGLAFQIVDDVLDVTADSQTLG
KTAGKDAANDKPTYVTLMGLDYAKKAATDLQETAIASLESFGAKAQALKDLALLVVNRGK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgcactttcatttgaagattgggttcgtgctcacgggcagcgaactgaattg
gttctcgagagtttgctcgatgctgcaaatgctaatcctgtacgtttgcacgcagccatg
cgttacgccgctcaaggtggcggtaagcgtattcgtcctttattggtttatgccgctggt
gagctaggtgatgattccggtgaagagaaaaataacgctctagattctgctgcgtttgca
attgaatgtattcacgcctactctttggtccacgatgatttgccttgtatggatgacgat
gatttacgccgtggacgtcctactgtacataaggcttatgacgaggcgactgctttattg
gttggcgatgcattacagactcgtgcatttgaggttttggcaaatacgcagtgcgatggg
aatacgcgcttggcaatgatcagtgcattggctagtgcgtctggttcgcgcggtatggct
ggtggtcaggcaattgatttggagagtgtgggtaaaaaattagatctcacaggcttaaaa
caaatgcatgcgatgaaaacaggtgctctactttcttgttctgtgcagatgggcggcatt
gctgccaagctcaatgcgattcaaatgcagcatctcaaaaactactctgaagctttaggc
ctagcctttcaaattgtggatgatgttttggatgtcaccgcagatagtcaaactttgggt
aaaaccgcaggaaaagacgcagccaacgacaagcccacctatgtgaccttgatgggttta
gactatgccaagaaagcggcaaccgatttacaagaaacggcaattgccagcttagagagt
tttggcgctaaagctcaagccctgaaagatttggctctattagtggttaatagaggtaaa
taa
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