Pseudomonas sp. ATCC 13867: H681_01600
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Entry
H681_01600 CDS
T02524
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H681_01600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdr03400
]
H681_01600
Enzymes [BR:
pdr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H681_01600
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H681_01600
DNA repair and recombination proteins [BR:
pdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H681_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
AGI22202
UniProt:
M4WU50
LinkDB
All DBs
Position
356149..356961
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AA seq
270 aa
AA seq
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MPELPEVETTRRGIAPYLEGQRVSRVIVRERRLRWPIPEDLDVRLSGQRILQVERRAKYL
LLNAEVGTLISHLGMSGSLRLVECGLPAARHEHVDIELESGLALRYTDPRRFGALLWSQA
PLEHELLRHLGPEPLTDAFEGERLYQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGSISRARYLKLAQEIKRILAIAIERGGTTLRDFVGGDGQPGYFQQELFVYGR
GGEFCKVCGSTLREVRLGQRASVYCPRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagtcgaaaccacccgccggggcatcgcgccctatctcgaaggc
cagcgcgtcagccgcgtgatcgtccgcgaacgccgtctgcgctggccgatcccggaggat
ctcgacgtacgtctctccgggcagcgcatcctgcaggtggagcggcgcgccaaatacttg
ttgctcaatgccgaggtcggcacgctgatcagccacctgggcatgtcgggcagtctgcgc
ctggtcgaatgcgggctaccggcggcgcgccacgagcacgtggacatcgagctggagtcg
ggcctggcgctgcgctacaccgatccccggcgtttcggcgcgctgctgtggagccaggcg
ccgctggagcacgaattgctgcgccacctcgggccggagccgttgaccgacgccttcgag
ggcgagcggctgtaccagctgtcccgtggccgcagcatggcggtgaagcccttcatcatg
gacaacgcggtggtggtcggcgtgggcaacatctacgccaccgaggcgctgttcgccgcc
ggcatcgatccgcgccgcgaggccggctccatctcccgtgcccgctacctgaagctggcg
caggagatcaagcgcatcctggcgatcgccatcgagcgcggcggcaccacgctgcgcgat
ttcgtcggcggcgacggccagccgggctacttccagcaggagctgttcgtctacggacgc
ggtggcgagttctgcaaggtgtgtggctcgaccctgcgcgaggttcgcctcggccagcgc
gccagcgtgtactgtccgcgctgccaacgttga
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