Pseudomonas sp. ATCC 13867: H681_07635
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Entry
H681_07635 CDS
T02524
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr03030
DNA replication
pdr03430
Mismatch repair
pdr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H681_07635 (dnaE)
03430 Mismatch repair
H681_07635 (dnaE)
03440 Homologous recombination
H681_07635 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdr03032
]
H681_07635 (dnaE)
03400 DNA repair and recombination proteins [BR:
pdr03400
]
H681_07635 (dnaE)
Enzymes [BR:
pdr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H681_07635 (dnaE)
DNA replication proteins [BR:
pdr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H681_07635 (dnaE)
DNA repair and recombination proteins [BR:
pdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H681_07635 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AGI23403
UniProt:
M4WTG3
LinkDB
All DBs
Position
1662199..1665729
Genome browser
AA seq
1176 aa
AA seq
DB search
MTATFVHLRLHTEFSLVDGLVRVKPLIKAVGGAGMPAVAVTDLSNMCSLVKFYKTAMGGG
IKPICGADIWLANRDDDGPLTRLTLLAMNAKGYRNLTELISRGWQEGQRNGEIIIEREWV
KEAAEGLIALSGSKEGEIGLALLEGNDALADSLLAEWLEVFPDRFYLDIQRTNRVNDEEH
VHAAMALSERSGAPLVATNDVRFIKPEDFEAHETRVCIGEGRALDDPRRSRSYSDQQYLK
SPAEMAELFSDIPEALENSVEIAKRCNIEVQLGKYFLPNFPIPFDDMDINDYLRHVSYEG
LEERLAVLWPRETTPNYEEKRQIYVDRLEFELGTIIQMGFPGYFLIVMDFIKWAKNNGVP
VGPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMEGRDRVIDY
VAGAYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADKLSKMIPFEVGMTLEKAFEQ
EEMLRDFLKTDEEAQEIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFAPIACDEEGAGL
VTQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIIHRKQQKAGDPNLVDIDRIPLDDKKT
YDLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKH
GREEISYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYSLGGADMLRRAMGKKK
PEEMAKQRGGFIEGCSANGIDPNLSGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKT
HWKAPFMAAVLTADMQNTDKVVTLIEECRHMKLRIVAPDVNNSEFRFTVDDEDQIVYGLG
AIKGVGEGPVEAITECRAEGGPFKTLFDFCDRIDLKRVNKRTLEALIRAGALDRLGPHFY
DEPKAYQAHVDINRAVLLASMEEAVKAAEQTSRSHDSGHMDLFGGVFAEPEADVYANHRK
VKELNLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQTVAGLIVNL
RVMKNKRGDKMGFVTLDDRSGRIEASLFAEAFAANQALLQTDALVVIEGEVSQDDFSGGL
RLRAKRVMGLEEARTSLAESLRVRVHADALKGDRLRWLADLCTRHRGSCPVTVDYSGEQA
RALLQFGEQWRIDPADNLIQALRDQFGRDNVFLNYR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccttcgttcacctgcgtctgcacaccgaattctccctggtcgacggcctg
gtgcgggtcaagccgctgatcaaggcggttggcggggctggcatgccggcggtggcggtg
accgatctgagcaacatgtgctcgctggtgaagttctacaagacggccatgggcggcggt
atcaagccgatctgcggcgccgacatctggctggcaaaccgcgatgacgacggcccgctg
acccgcctgaccctgctggccatgaatgccaagggctatcgcaacctgacagagctgatc
tcccgtggctggcaggaaggccagcgcaacggcgagatcatcatcgagcgcgagtgggtg
aaagaggcggctgaaggcctgattgcgctgtccggctccaaggagggcgagatcggcctg
gcgctgctggagggcaacgatgccctggcggactcgctgctggccgagtggctggaagtc
ttcccggaccgtttctacctggacatccagcgcaccaaccgggtcaacgacgaagagcac
gtgcatgccgccatggccctgtccgaacgcagcggtgcgccgctggtggcgaccaacgac
gtgcgcttcatcaagcccgaggacttcgaggcccacgagacccgcgtgtgcatcggcgaa
ggccgcgccctggacgacccgcgccgctcgcgcagctattccgaccagcagtacctgaag
agcccggcggaaatggccgagctgttcagcgatattcccgaagcgctggaaaattccgtc
gagatcgccaagcgctgcaacatcgaggtgcaactgggcaagtacttcctgcccaacttc
cctatccccttcgacgacatggacatcaacgattacctgcgccatgtctcctacgagggc
ctggaagagcgcctggcggtgctctggccgagggaaaccacgcccaattacgaagagaag
cggcagatctacgtcgaccgcctggagttcgagctgggcaccatcatccagatgggcttc
cccggctacttcctgatcgtgatggacttcatcaagtgggcgaagaacaacggcgtgccg
gtaggccccggccgaggctcgggtgccggctcgctggtcgcctacgtactgaagatcacc
gacctcgacccgctggcctatgacctgctgttcgagcgtttcctcaaccccgaacgtatt
tccatgcccgacttcgacgtcgacttctgcatggaaggtcgcgaccgggtgatcgactac
gttgcgggcgcctatggtcgtaatgcggtcagccagatcatcaccttcggctcgatggca
gcgaaggcggtggtgcgcgacgtggcgcgggtgcagggcaagtcctacggcctggccgac
aaactgtcgaagatgattcccttcgaagtcggcatgaccctggagaaggccttcgagcag
gaggaaatgctccgcgacttcctcaagaccgacgaggaagcccaggaaatctgggacatg
gcgctcaagctggaaggcgtcacccgcggtaccggcaagcacgccggtggcgtggtgatc
gcaccgaccaagctgaccgacttcgctcccatcgcctgtgacgaagagggcgccggcctg
gtgacccagttcgacaaggacgacgtggaagccgccggcctggtgaagttcgacttcctc
ggcctgcgtaccctgaccatcatcaaatgggcgatggagatcatccatcgcaagcagcag
aaggccggcgaccccaacctggtcgacatcgaccgtatcccgctggacgacaagaagacc
tacgacctgctgcagaaggcggagaccactgcggtcttccagcttgaatcgcgcggcatg
aaggagctgatcaagaagctcaagccggactgcctggaagacctcatcgcactggtggcg
ctgttccgtcccggcccgctgcagtcgggcatggtggacgacttcatcaaccgtaagcac
ggtcgcgaggaaatctcctacccgcacccggattaccagtacgccggcctcgaaccggtg
ctcaagcccacctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtg
atggcgggctacagcctcggcggcgcggacatgctgcgtcgcgcgatgggcaagaagaag
cccgaggaaatggccaagcagcgcggcggtttcatcgaaggctgctccgccaacggcatc
gatcccaacctctcgggcaacatcttcgacctggtggaaaagttcgccggctacggcttc
aacaagtcgcactccgccgcctacggcctggtgtcgtaccagaccgcctggctgaagact
cactggaaagccccgttcatggccgcggtactgaccgcggatatgcagaacaccgacaag
gtggtgacgctcatcgaagagtgccgccacatgaagctgcgtatcgttgcgccggacgtg
aacaactccgagttccgcttcaccgtggatgacgaggaccagatcgtctacggcctgggc
gcgatcaagggcgttggcgaaggcccggtggaagccatcaccgagtgtcgcgccgaaggt
ggaccgttcaagacgttgttcgacttctgcgaccgcatcgacctcaagcgcgtcaacaaa
cgcaccctggaggcgttgatccgcgccggtgcgctggaccgcctcggcccgcacttctac
gacgaacccaaggcctaccaggcccacgtcgacatcaaccgcgccgtgctgctggcgtcg
atggaggaggccgtcaaggccgccgagcagacctcgcgtagccacgacagcgggcacatg
gacctgttcggcggggtgttcgccgagcccgaggccgatgtctacgccaaccatcgcaag
gtcaaagagctcaatctcaaggagcgcctgaagggcgagaaggacaccctcggcctgtac
ctgaccggccatccgatcgacgagtacgaaggtgaagtgcgacgttttgcccgccagcgc
atcgtcgagttgaaaccggcgcgcgatacccagaccgtcgccggcctgatcgtcaacctg
cgggtgatgaagaacaagcgcggcgacaagatgggcttcgtgaccctggacgaccgctcc
ggccgtatcgaagcctcgttgttcgccgaagccttcgccgccaaccaggcgctgctgcag
accgatgcgctggtggtgatcgagggcgaagtcagccaggacgatttctccggcggcctg
cgcctgcgcgccaagcgcgtgatgggcctggaagaggcacgcacctcgctggcggaaagc
ctgcgcgtgcgcgtgcatgccgatgcgctcaagggcgaccgcctgcgctggctggccgac
ctgtgcacccgtcaccgcggcagttgcccggtcaccgtcgactacagcggcgagcaagcg
cgcgccctgttgcagttcggcgagcaatggcggatcgaccccgcagacaacctgattcaa
gcgttgcgtgaccagttcggtcgcgacaacgtcttcctgaactaccgctag
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integrated database retrieval system
