Photobacterium damselae subsp. damselae: CAY62_03625
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Entry
CAY62_03625 CDS
T04927
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds02020
Two-component system
pds02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CAY62_03625
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CAY62_03625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pds03021
]
CAY62_03625
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pds02035
]
CAY62_03625
Transcription machinery [BR:
pds03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CAY62_03625
Bacterial motility proteins [BR:
pds02035
]
Flagellar system
Flagellar assembly proteins
Stator
CAY62_03625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Ketoacyl-synt_2
GerE
Motif
Other DBs
NCBI-ProteinID:
ARR48747
UniProt:
A0A1X9TZI2
LinkDB
All DBs
Position
I:787499..788221
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AA seq
240 aa
AA seq
DB search
MNRALTYGRYQESPQAFIARHSSLVKRIAHHLMARLPPNILIEDLIQAGMIGLLEAQQNY
DPTKGASFETFAGIRIRGAMLDDIRRGDWVPRSVYKNSRRISEAMAQLEHELGRDPNDHE
VAEHLEMSLEQYHQALNDVNCGRLVGIDDLGISEDAVANDELLEENLPFQGVVDDSFHQA
LAEAIKTLPEREALVLSLYYDEELNLKEIGAVIGVSESRICQIHTQAMQRLKAKLKAWQN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagagcgctaacttacgggcgctatcaagaaagtccacaagcttttattgcccgt
cactcatcgttggttaaacggattgctcaccatttgatggcgcgtttaccaccgaatatt
ttgatcgaagatttaattcaagcgggcatgatcggcttgcttgaagcacagcaaaattat
gacccgaccaaaggtgcgagttttgagacctttgccggaattcgtatccgtggtgctatg
ttggatgatattcgtcgtggagattgggttccgcgctctgtttacaaaaacagtcgccga
atcagtgaagcgatggcccaacttgagcatgaattagggcgagatcctaatgaccatgag
gttgctgagcacttagagatgtcgctggaacaatatcatcaagcacttaacgatgtaaat
tgtggtcgtttagttggtatcgatgatctcggtatctctgaagatgcggttgcgaatgat
gaattattagaagaaaatctaccttttcagggagttgttgatgatagtttccaccaagcg
ttggcagaagcgatcaaaacgctaccggaaagagaggctctggttttatcgctttattat
gatgaagagttaaacctaaaagagattggtgcagtaattggggtgagtgaatctcgcatt
tgtcagattcatacccaagcaatgcagcgtttaaaagccaaactaaaagcttggcaaaat
taa
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