KEGG   Paenibacillus durus: PDUR_16160
Entry
PDUR_16160        CDS       T03297                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pdu  Paenibacillus durus
Pathway
pdu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PDUR_16160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdu03019]
    PDUR_16160
Messenger RNA biogenesis [BR:pdu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PDUR_16160
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_KhpA-B KH_PNO1_2nd HDOD KH_NusA_2nd DUF4083 KH_2 Innexin
Other DBs
NCBI-ProteinID: AIQ13271
UniProt: A0A089HMR8
LinkDB
Position
complement(3668431..3669972)
AA seq 513 aa
MDTWIWVIIVLVVATLFFGFGYFIRKSLAEAKISSAEQAASVIVENAKKEAEALKKETVL
EAKDEVHRIRTEAEKETRERRNEIQRQERRLLQKEESLDKKMESLERKEEQVANKEKRID
ETQQQIDVIYRNQVAELERISNLSMEDARSIILSNVEQEVRHETAQMIKDIEQQAKEEAD
KKSREIITLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLIID
DTPEAVILSGFDPIRREVARTALEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQAT
FEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLTGLMAGELGEDIVLAKRAGLL
HDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDAEATSVIAMLVGAADALS
AARPGARRETLETYIKRLEKLEEISESFEGVEKSYAIQAGREVRVMVQPDKIDDAEAFRL
ARDITKTIENELDYPGHIKVTVIRETRAVEYAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggacacctggatctgggtcatcatcgttctcgttgtagcgacattattctttgggttc
ggttattttattcggaaatcccttgcagaagctaagatttccagcgcggaacaggctgct
agcgtaatcgtggagaacgcgaagaaggaagcggaggcgctgaagaaggaaacggtattg
gaagccaaggacgaagtccacagaatccgtaccgaggctgagaaggaaactcgcgaacgt
cggaatgaaatccaacgtcaggaaagacggttgctgcaaaaggaagaatcgctggataaa
aaaatggaatcgcttgaacgaaaagaagaacaagtggctaacaaagagaaacgaattgac
gaaacccagcagcaaatcgatgtaatttacagaaatcaggttgctgaattggagcgtatc
tccaatttgagcatggaagacgcaagaagtattatcctttccaatgtagaacaggaagtt
cggcatgaaaccgcgcagatgatcaaggatattgaacagcaggccaaggaagaagcggac
aagaagtcccgcgagatcattaccctagctattcaacgctgcgccgccgatcatgtagcg
gaaacaacggtatccgtcgttacacttccgaatgaagagatgaagggacggataatcggc
cgcgaaggccggaatatccgcgctctggaaaccctcaccggtattgaccttattatcgac
gacacgccagaagcggttattttgtcaggatttgatccgattcgccgggaagtggcccgt
acggcactggaaaagctggtggcagacggacgtatccatccggcgcgtatcgaagaaatg
gtcgagaaatcgcgtaaggaagtggatgaacggattcgggaatatggcgagcaagccacc
ttcgaggttggcgttcatggtctgcacccggatttgatcaaaattctcggtcgactgaaa
ttccgtacgagctatggtcagaacgtattgaagcactccatggaggttgcttatttgacc
gggctgatggccggtgagcttggggaagacatcgtgctagccaaacgcgcgggactgctt
catgatatcggcaaagcgctggatcatgaggtggaaggctcacacgtcgagatcggcgta
gagcttgctaagaaatataaagaacatcctgttgtcattaatagcattgcttcccatcac
ggggacgcagaagcgacttcggttatcgctatgctggttggtgcggctgacgcattgtcg
gcggcaagaccgggagcgcgccgggaaacgctggaaacgtatatcaagcgtctggagaag
ctggaggagatttccgaatctttcgaaggcgtcgagaagtcatatgcgattcaagccggc
cgtgaggtccgcgtaatggtgcagcctgacaagatcgacgatgccgaagctttccgtctg
gcgcgcgatattacgaagacgattgaaaatgaactggactacccgggtcatatcaaggtc
actgttattcgcgagacacgggcggttgagtacgctaaatag

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