Prunus dulcis (almond): 117619610
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Entry
117619610 CDS
T07328
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117619610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117619610
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
117619610
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
117619610
NCBI-ProteinID:
XP_034205493
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Position
2:complement(18641556..18644395)
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AA seq
645 aa
AA seq
DB search
MEEEGGGKVRVLIEKATTSTEPEVDPRLLKAIKSVVRRSDSELRLAAHILMDLMKREHSQ
VRYLTLLIIDELFMRSKLFRTLVVESLDQLLTLSVGFRNNSPLPGPTNVATALRSKAIEF
LEKWNASFGIHYRQIRLGFDYLKNTLKYQFPNLQANAARLHQERRERERKSKEILLNKFE
TLKKNFASIKEEIQSTADEIGECLEIVRAKEERELLCPLDDEDMEEFHSYEFRQLRLHSL
EEADKIHENSENKVVFDALRELYKLLVMKHLVAVQEWISVLVRVELTDNRARDSYLKEFI
DIRNHIQSVKKKCEESGCAIPNTTNHEEEDFWEEGKIGSIESKRSSIPNNRTEDSVASTS
KEVLDRVPECHTNERDGNKRLNRKDGATNSDPLRSKLLAEAPEVNWGSYLDNWGSKRDVL
ANHRGLELESHWGRVDQDAVIPAEKIAELNLQTTLYKEQQVEIQPCRAPLSKGELCQRRD
LRTCPFHGPIIPRDDEGKPLNQNPSKDEKTPDLGTDIVEQLAKRAVKNVRDKDKELARKR
EIDKKSLKRAKLAKIREHNEAVLRDAAMASTSRSADIGEDWVATNGENRSSRNKKKALAS
MLQKKETPKDRLAQRLLNTRASAATVRQLTLGEDANYREAFPNQW
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagggaggagggaaggtgagggttttgatagagaaggcgacgacctcgacc
gaaccagaggtggacccgcgcctcctcaaggccatcaagtcggtggtgcgccgctcggat
tcggagctccgactggccgcccatattctcatggatcttatgaagcgcgagcactctcag
gtccggtacctcacacttcttataatcgatgagctttttatgaggtcaaagctttttaga
acccttgttgtggagagtttggatcagttattgactttgagtgtcggatttagaaacaat
tcgccactcccaggtccgacaaatgttgcgactgctctgcgttcgaaggcaattgagttt
ttggagaagtggaatgcttcatttgggattcattataggcagattagattaggatttgat
taccttaaaaacacgcttaagtatcaattcccaaatctacaggcaaatgcggctcggctt
catcaggaaagaagggaaagggagaggaagtcgaaagagatcttattgaacaagtttgag
actttgaaaaagaattttgcatcaataaaggaagaaatacagtcaacggctgatgagatt
ggggagtgtttagaaattgtacgtgctaaagaggaacgtgagctattgtgtcctttagat
gatgaagatatggaagagtttcattcttatgagttccggcagttgcgcttgcattcgttg
gaagaagcagataaaattcatgagaacagtgaaaacaaagtagtttttgatgcactgaga
gagctttacaagctattggtaatgaagcatttggttgcagtgcaagaatggatctctgtt
cttgtaagggttgaactgactgataacagggccagagattcttatttgaaggagttcatt
gatatccggaatcatattcaatcagtgaagaagaagtgtgaagaatcgggttgtgctatt
ccaaacacgacaaatcatgaagaagaagatttttgggaggaaggcaagattggatcaatt
gagagtaagaggtctagtattcccaataacagaactgaagattcagtggcatcaacttcc
aaggaggtactggacagagttcctgaatgccatactaatgagagagatggcaataaaagg
ctcaatcgtaaagatggagcaaccaattcagaccctttgaggagtaagcttttggctgaa
gctccagaggtgaattggggctcttatttggacaactggggttcaaagagggatgtattg
gctaaccatcggggattggagcttgaaagtcattggggcagggtggatcaggacgcagtt
attccagcagaaaagattgcggaattaaatcttcagactactctatacaaagaacagcag
gttgaaattcaaccatgccgagctcctctaagcaaaggtgaactttgtcagagaagagat
ttgagaacttgcccatttcatggacctattatacccagagatgatgagggaaagccgctc
aatcagaacccttcaaaagatgagaaaactcctgatttaggcaccgatatagtggaacag
ttagcgaaacgagccgtgaagaatgttcgtgacaaagataaagagttggcaaggaagaga
gaaatagataaaaagtcactgaagcgtgcaaagcttgcaaaaatacgagaacacaatgaa
gcagttttacgtgatgctgcaatggcttcaacttctagatctgccgatattggagaagat
tgggtggcaactaatggtgagaaccgatcatccagaaacaaaaagaaagcccttgcctca
atgctgcagaagaaagagacaccaaaagacagattagctcagaggcttttaaatactcgt
gcaagtgctgccactgtaagacagcttacattgggtgaggatgcaaattacagagaagcc
ttcccgaatcagtggtaa
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