KEGG   Prunus dulcis (almond): 117622986
Entry
117622986         CDS       T07328                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
pdul  Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117622986
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    117622986
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 DEAD Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 zf-RING_4 zf-Di19 zf-ANAPC11 UBA_Rad5 zf-RING_11 TackOD1
Other DBs
NCBI-GeneID: 117622986
NCBI-ProteinID: XP_034209700
LinkDB
Position
3:complement(23616180..23622551)
AA seq 1033 aa
MGNKVTEELLSTVRTIVGSAYSDMDIIRALHMANNDVTAAINIIFDTPSFKLKERSGFPK
KPNLLSSEVVNSNQNGGQKSNCSLENEGNGGRCPSNSGVEVVEDVARCESLVGSEWWFVG
CSEVAGLSTCRGRRIKAGDEVDFTFPLKSSSILPSPGKGFGRGRQVAACSEIVRFSTKDS
GEIGRIPKEWARCLLPIVRDKKIRIEGHCKSAPDILSIMDTIVLSISVYINSSMFLKQNK
TSLKAANNSTEETVVHPLPTLFRLLGQTPFKKAEFTPSDLYTRKRPLDPKDSSGLCAPMP
HANKPKNPGRNGGEVENEESISDADLDNIVGVGDSSQLEEMDPPSTLQCELRPYQKQALH
WMIQLEKGQCIDEGAMTLHPCWEAYRLADKRDRVIYLNAFSGDATTEFPSTLQMARGGIL
ADSMGLGKTIMTIALLLAHSGHGLSGSHPTSQSSSEDIEISDISDHSPSNLPKKVTSFSG
FDKFMKRKNTLADGGSLIICPMTLLGQWKAEIETHAQPGSLSVYVHYGQSRQKDAKLLAQ
SDVVITSYGVLASEFSAENPKENGGLYSVSWFRVVLDEAHTIKSSKSQISVAAAALVAGR
RWCLTGTPIQNNLEDIYSLLRFLRVEPWGNWAWWNKLIQKPFEEGDERGLNLVQSILKPI
MLRRTKFSTDRDGRPILVLPPADIQVIYCELTEAEKDFYEALFKRSKVKFDQFVEQGRVL
HNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLARRFLKGSQNSLEGEAKDLPSR
AYVQEVVEEMRKGEHVECPICLEAFEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRKN
MSKQDLITAPTESRFQVDVEKNWVESSKVNILLRELESLRLSGSKSIVFSQWTAFLDLLQ
IPLSRSNISFLRLDGTLNQQQREHVLKQFSEDSDILVLLMSLKAGGVGINLTAASNAFVL
DPWWNPAVEEQAVMRIHRIGQTKRVMIRRFIMKGTVEEKMEAVQARKQRLISGALTDQEV
RTARIEELKMLFT
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggggaacaaggttacggaggaactgttgtctaccgtccgaacaatcgtcggctcggca
tactcggacatggacataatcagagccctgcacatggccaacaacgacgtcaccgccgca
atcaacataatcttcgacacgcccagtttcaaattgaaagaaagatcaggttttccaaag
aagcccaaccttttgagctccgaggtcgtgaattcaaaccagaatggcggtcagaagagt
aattgctcattggagaacgaaggaaatggtggtagatgtcccagtaattcaggtgttgaa
gttgttgaagatgttgctcggtgtgagagcttggtggggagcgagtggtggtttgtgggc
tgcagcgaagtggccggtctatcaacgtgtagaggtaggaggatcaaggctggagacgaa
gtggatttcacttttcctttaaagagcagttcgattttgccgtctcccggcaagggtttt
gggaggggacgtcaggtggccgcttgttcagagattgtgaggttctcaacaaaagattcg
ggagagattggtcgaatacctaaggaatgggctcggtgtctattgccaattgtgagggat
aagaagattagaatcgaggggcattgcaaatctgctcctgatatcttgagcattatggac
accattgttttgtcaataagcgtgtatatcaatagttcaatgttccttaagcaaaacaag
acctcgcttaaggcagcgaataactccacggaggaaacagtggttcatcctctcccaaca
ttgttccggttgctaggccaaactcctttcaagaaggcagaattcactcccagtgacttg
tatacgagaaagcgccctttggacccaaaggacagttctgggctttgtgccccaatgcca
catgccaataagcctaaaaaccctggtagaaatggaggtgaagttgaaaatgaggagtcc
atttcagatgctgaccttgataacattgttggtgttggagacagctctcagctagaggaa
atggatcctccaagcacacttcagtgtgaacttcgtccataccagaagcaggctctccat
tggatgatccaactggaaaaaggacaatgcatagatgagggagcaatgactcttcaccct
tgttgggaggcatatcgtcttgcagacaagagagaccgtgttatctatttaaatgcgttt
tctggggatgcaacaacagaatttccaagcacacttcaaatggccagaggaggaattctg
gctgattctatgggcttggggaagaccattatgacaatagcactccttcttgctcattca
ggacatggattatcaggtagtcaccctacaagccagtcctccagtgaagatattgaaatt
agtgacatttcagaccattccccatcaaacctaccaaagaaggtcacaagcttttcagga
tttgataagtttatgaagcgaaaaaacacccttgcagatggtggcagtttgattatatgt
cctatgactcttctaggccagtggaaggcagagattgaaactcatgcgcaacctggatct
ttatcggtatatgttcattatggacaaagtaggcagaaggatgcaaaacttttagctcaa
agtgatgttgtaatcacttcatacggagtgttagcctcagaattttctgcagagaatcct
aaggaaaatgggggactttactcggttagttggtttagagtggttcttgatgaggcgcat
accataaaatcctctaagagccaaatttctgttgctgctgctgctttagttgctggtcgt
cgatggtgtcttactggcacaccaatacagaacaacctggaggacatttacagtcttctt
cgatttttgagggttgaaccttggggaaactgggcatggtggaataaactcatccaaaaa
ccttttgaggagggtgatgagagagggttgaatttggttcaatccatcttaaagccaatc
atgttaaggagaaccaagtttagcacagatcgcgatggcaggccaattttagtccttccc
ccagctgatattcaggtgatttactgtgaactcacagaagctgaaaaagacttctatgag
gccctctttaaaagatcaaaggtgaagtttgatcaatttgtggagcaaggacgggttctt
cataattatgcatccatattggagttacttttacgtcttcgccaatgttgtgatcatccg
tttcttgtgatgagtcgaggtgatacacaagaattttctgacctgaataagctagctagg
cgtttccttaaaggcagccagaactctttggaaggggaagccaaagatctgccttcacgg
gcttatgttcaagaagttgtagaagaaatgcgtaagggggaacatgtagagtgtccaata
tgtcttgaagcctttgaagatgcagtgttgacaccttgtgctcaccgcttatgccgtgaa
tgtctcttggcaagttggcggaattcaacttctggtttatgtcctgtgtgtaggaagaac
atgagtaagcaagatcttattacagcaccaactgagagtcgattccaggttgatgttgag
aaaaactgggtggaatcatccaaagttaatattcttctgcgtgaacttgaatctcttcgc
ttgtcaggctcaaagagcattgtcttcagccagtggacagcttttctggacctcttgcag
atccctctttctcggagtaacatttcatttcttcgccttgatgggacgctgaatcaacag
cagcgtgaacacgtgttaaaacagttttcagaagatagtgacattctggtgttactaatg
tcactgaaggcaggaggagttggaataaatctaacggcagcatcaaatgcctttgtcttg
gatccatggtggaatccagctgtggaggaacaagctgtcatgcgtattcatcgtattggt
caaacaaaaagggtgatgatcaggcggtttatcatgaagggaacggttgaggagaaaatg
gaagcagtacaagcacgtaagcagcgactcatttcgggtgctttgactgaccaagaagtt
cgaactgctcgcatagaggaactaaagatgctttttacttga

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