Prunus dulcis (almond): 117630758
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Entry
117630758 CDS
T07328
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117630758
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117630758
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_14
AAA_23
AAA_22
AAA_15
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_27
VapE-like_dom
AAA_30
DUF5906
AAA_24
RecG_N
Motif
Other DBs
NCBI-GeneID:
117630758
NCBI-ProteinID:
XP_034219412
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Position
6:complement(7861710..7866240)
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AA seq
596 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAASSKSAATESQNGADKLSNGVGAMHISDRNCTGV
LCSHPLSRDIRIESLTVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCREL
PIPDHMDIYHLSREIEASDMSSLEAVISCDEERIRLEKEVEELAAQDDGGGEQLERIYER
LEALDAATAEKRAAEILYGLGFDKQMQAKKTRDFSGGWRMRIALARALFINPTILLLDEP
TNHLDLEACVWLEETLKNFERILVVISHSQDFLNGVCTNIIHMQSKKLKIYTGNYDQYVQ
TRSELEENQMKQYKWEQEQISNMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKV
ARDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAGK
STLLKLMTGELFPTDGMVRRHNHLRIAQFHQHLAEKLDMELSALAYMIKEYPGNEEEKMR
AAIGKFGLSGKAQVMAMKNLSDGQRSRVIFAWLAFRQPQLLLLDEPTNHLDIETIDSLAE
ALNEWDGGLVLVSHDFRLINQVAQEIWVCENQAVTRWEGDIMDFKRHLKVKAGLGE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgacgcgagcaagaagaaggcggcgcagaagaaggcggcggcggcggccaag
agaggtggaaaggcggcggcgtcgtcgaagtcggctgcgaccgagtcgcagaacggagct
gataagctatcgaatggcgtcggggcgatgcatatttcggatcgtaactgcaccggtgtt
ctctgttcgcatcctctgtctagagatatccggatagagtctctaacagttaccttccat
ggacacgatctgatagttgattctgaactggagcttaattatggcagacgttacggtttg
cttggtttgaatgggtgtggtaaatctactctcctaactgcaataggctgccgagagctt
ccaattccagatcacatggatatctaccatctcagcagggagattgaagcttcagacatg
tcttcacttgaggctgtcattagttgtgatgaggagaggataaggttggagaaagaagtt
gaagaactggcagctcaggatgatggtggtggagagcagcttgaacgcatttatgagcgc
cttgaagcattggatgcagcaactgcagagaagcgtgctgctgaaattctatatggtctt
gggtttgacaagcagatgcaagcaaagaaaactcgggatttttctggtggttggagaatg
aggattgcacttgcacgtgctctgtttataaacccaaccatcctgttgctcgatgagccc
accaatcatcttgatttagaagcctgtgtgtggttggaggagaccttgaagaactttgag
cgcatcctggtggtgatttcacactcccaggattttcttaatggtgtgtgcacaaacatc
atccatatgcagagcaagaaactgaagatctacactggaaactatgatcagtatgttcag
actcgttctgaactagaggagaaccagatgaaacagtataagtgggagcaggaacagatt
tctaacatgaaggaatatattgctcggtttgggcacgggtcagcaaaattagctcgtcag
gcacagagcaaagagaaaaccctagcaaaaatggagcgcggtgggcttacggaaaaggtg
gccagagacaaggttctggtcttccgttttgttgatgtgggaaagctgccaccgcccgta
cttcagtttgtagaagtcacatttggttacactcctgataatctgatctacaagaacatt
gactttggggttgatttggactcgcgtatagctctggttgggccaaatggagctggaaag
agtactctcttgaagctgatgacaggggagttgttccctactgatggcatggtccggagg
cacaatcaccttagaattgctcagttccatcagcacttggctgagaagcttgatatggaa
ctgtctgccctggcgtatatgatcaaagagtacccaggaaatgaggaagaaaagatgagg
gctgcaattggtaagtttggcctatcgggtaaggcacaggtgatggcaatgaagaattta
tcggatggacagaggagccgtgtgatctttgcttggttggcatttaggcagccccaatta
cttttgttggatgagccaaccaatcacttggatatcgagacaattgactcactggctgag
gcactgaatgagtgggacgggggtctggttcttgttagccatgatttcaggctcataaac
caagtagctcaggaaatttgggtatgtgaaaatcaagctgtgacccggtgggagggcgat
attatggactttaagcggcacctaaaggttaaggctggtttaggtgaatga
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