KEGG   Prunus dulcis (almond): 117631024
Entry
117631024         CDS       T07328                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03013  Nucleocytoplasmic transport
pdul03015  mRNA surveillance pathway
pdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117631024
  09122 Translation
   03013 Nucleocytoplasmic transport
    117631024
   03015 mRNA surveillance pathway
    117631024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117631024
   03041 Spliceosome [BR:pdul03041]
    117631024
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117631024
    TREX complex
     117631024
Spliceosome [BR:pdul03041]
 Complex C
  Other components
   EJC/TREX
    117631024
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117631024
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 117631024
NCBI-ProteinID: XP_034219833
LinkDB
Position
6:complement(5732509..5736535)
AA seq 252 aa
MQDPLNMSLDDLIKTSKKSGSGNARGRGRASGPGPARRLPNRAANRTTPYAAAKAPETAW
QHDLYTDQGAAAFPAQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGVHY
DRSGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGGPPTLPPAAN
GNFGNSNGVPRGGQSRGGAFGRIRGGGGRGPRRGGRGRGSGNGGGRGRGGEKVSAEDLDA
ELEKYHAEAMQE
NT seq 759 nt   +upstreamnt  +downstreamnt
atgcaggaccctctaaacatgtccctcgacgacctcatcaagaccagcaagaaatccgga
tcgggcaacgctcgaggccgtggccgggcctcaggacccggacccgcccgccggttgccc
aatcgtgccgccaatcgtacgacgccgtatgcggcggccaaggcgccggagaccgcgtgg
caacacgacctgtatacggatcagggggcggcggcgttcccggctcaagctggaagagcc
tcggccattgaaactggaaccaagctctacatctccaatctcgattatggcgtttccaac
gaggacattaaggaactgttttcagaggttggtgacctgaagcgatatggagtacattat
gaccgaagtgggagatcgaagggaacggcagaagtagtcttctcacgacgaccagatgct
gttgccgcggttaaaagatacaacaatgttcagcttgatgggaaaccaatgaagatagag
attgtaggaacgaacatttcgacacctggcggacctcctactttgccccctgctgctaat
ggcaactttggaaattcgaatggagttcctaggggtggacagagtaggggtggtgcattt
ggacgtatacgtggcgggggtggccgtggtcctagaagggggggccgtggacgtggaagt
ggtaatggaggtggaagaggccgtggtggtgaaaaggtatctgctgaagatcttgatgcc
gagctggagaagtaccatgcagaagcaatgcaagagtaa

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