Prunus dulcis (almond): 117631056
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Entry
117631056 CDS
T07328
Name
(RefSeq) sister chromatid cohesion 1 protein 4 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdul03036
]
117631056
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117631056
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
117631056
NCBI-ProteinID:
XP_034219875
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Position
6:29556661..29568995
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AA seq
1154 aa
AA seq
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MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSTREQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLDFDEDL
FLGKVAAQGTDGISGGDPQALVQSTTPLEKHEIYEGIPGTSEIMQMNGIGNENEVLAAST
ENVTYAQAPSTPGLFEEPNLSGVQEPMACNDQLDLEDHNLSNLAAIRSPENICSVPGPRC
GDDSTMVLNEENGYQLGDMEIKQAKPQEHEQIKPISPVLECANGTVGALDCPNRVEDIYN
GIVINTEPAMLFLDQKDAQSVEPAVVRLDEPVASPSCSQVTYELEDPARKICSNSSCARV
SEDYLEDQQTSLKPEIQNDVEIANNMGESCTLNIKDSFNPLTHEEMSSAEVPVLRACNSV
PNHHNMLSPANISEIPGNLPSEVVGPSSLDNATSFDNQLENLDRSATYDLPAPEKLLSVP
EGFTSKPSDFLMESTPDKEIIGGDAGDDTGIKLISGKKRSSTESTMTVQSLNSVESFGEA
RGKRTAESIPDDDDLLSSILVGRRSSVLKMKPTPLAPDIICSKRSRTAVRSTASKRKVLM
DDTMVLHGDTIRQQLTNTEDIRRVRKKAPCTRPEISMIQRQFLEDDIFTVPVLTGMSVEL
IFLHTETFDLSRTRVSENDQDSASADLLKDVEAYARPNVSKEIEPVRSTEPVIVTDDLEA
QSAGVPIENENQEAEDHNRISQDTDAQEQGITDLEEFNTCKHQPSGEIAEMEIEKEIFEV
ADPVLGDVNNVSTDVNVQSRLLDKKTDDEDVLLQMDALCMSPGKKLDAQPMEVDASMVDA
SIQKGADAIDAFEHTVEIRADVQIGFSDLTDNINATLATVSLETEECKNLSFSNDQPVEE
IGNNEQHMGNETEVLDANFGCDDKDPKSSCLFGDGDNIAPLNGKESLGSPEADLQSGIEA
EVTAEHPAEDFGHFEDVVLGNDTEFLNVDDDDIAEDVDDMPCAEDTRLLENSGWSSRTRA
VAKYLQTLFDKEAVNGKRVLGMDSLLNGKTRKEASRMFFETLVLKTRDYIHVEQAKPFDN
VNIRSRVKLMKSDF
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgttttattctcagtttatattggcgaagaaaggcccgcttggaacgatatggatagcg
gcacatttggagcgcaaacttcgaaagaatcaggttgccgacaccgatattggcgtctct
gtagattctattctttttcctgaagttccgattgctcttaggttgtccagccatcttctg
cttggtgtggtgaggatatattctagaaaggtcaattacctgtttgatgattgcagtgag
gctttgcttaagataaagcaagcttttcgctccactgcagttgatttacctccagaagaa
tctactgctccatatcattccatcacattgcctgagacttttgatcttgatgattttgag
ctaccagataatgaaatttttcagggtaattatgttgatcatcatgtcagtacaagggag
caaataactctccaggatacaatggagggtgtggtatactcgacatctcagtttggattg
gacgagcggtttggtgatggcgatacttctcaaattggtctagactttgatgaggaccta
ttcttaggcaaggttgcagctcaagggactgatggaatttcaggtggtgatcctcaggcg
ttggtccaatccacaacacctctggaaaagcatgaaatttatgaggggatacctggaact
tcagaaatcatgcaaatgaacgggattggaaatgagaatgaagtcctagctgcaagtact
gaaaatgtcacatatgctcaggctccatcaactcctggactatttgaagagccaaacctg
tctggtgttcaggaacctatggcgtgcaatgatcagttggatttggaagaccataattta
tcaaacttagcagcaattcgcagcccagaaaatatttgtagtgtgccaggtccgcgttgt
ggggatgatagtacaatggttttgaatgaggagaacggctaccagttgggcgatatggag
atcaagcaagcaaagccacaggagcatgagcaaattaaacccatttctccagtattagaa
tgtgcaaatgggacagttggtgctttggattgtccaaacagggtggaagatatatataat
ggtattgtaataaacactgaacctgctatgctcttcctagatcaaaaggatgcacaaagt
gtagaacctgccgtagttaggttggatgaacctgttgcatctcctagctgctcccaggtc
acatatgaattggaggaccctgctcgtaagatttgttcaaatagttcctgtgcgagagtg
tcagaggattatttggaggaccaacagacatctttaaagcctgaaatacagaatgacgtt
gaaattgctaataatatgggagaatcatgcacacttaacattaaagattcttttaatcct
cttactcatgaggagatgtcatctgctgaagtgcctgtactccgggcatgcaactccgtc
ccgaatcatcataatatgctatctcctgcaaatatttcagaaattcctggcaacttacct
tccgaggttgttgggccaagttctttggacaatgcaacatcttttgacaatcaacttgag
aatttggataggtctgccacctatgacttgcctgcacctgaaaaattgctctctgtacca
gaggggttcacttcgaaaccaagtgattttctaatggaatctacgcctgacaaagaaatc
ataggtggggatgctggtgatgatactgggatcaaactcatctcagggaaaaaacgtagt
tccacagaaagtactatgacagtgcagagtttaaattcagtcgaatcatttggagaggcc
cgaggaaagagaactgcagaatccatccccgatgatgatgatttattgtcttctatttta
gttggaagacgatcttcagttttaaaaatgaaacccactccacttgcacctgacataata
tgctcaaaacgctcccggactgctgttcgcagtactgcctcaaagaggaaagtgctaatg
gatgatacaatggtcttgcatggcgatacaatacgccagcagttaacgaatactgaagac
atacgtcgtgtgagaaagaaggctccttgtactcgcccagaaatttcaatgattcagaga
caatttttggaagatgatattttcactgtacccgtacttactggcatgtcggtggaacta
atatttctgcacacagaaacatttgatctaagtagaaccagggtttctgaaaatgatcaa
gacagtgcttcggcggacttactgaaggatgtagaggcttatgccaggccaaatgtaagt
aaagaaattgaacccgttagaagcactgaacctgtaattgtgacagatgatctggaagca
caatctgctggtgttcctattgagaacgaaaaccaggaggctgaagatcataatcgaata
tctcaggatactgatgctcaagagcaagggattactgacctagaagaatttaatacttgc
aaacatcaaccctcaggggagatagctgaaatggaaattgaaaaagagatttttgaagtt
gctgatcctgttttaggagatgttaacaatgtgtcaactgatgttaacgtccagtcaagg
cttttggataaaaaaactgatgatgaagatgtgttgctgcagatggacgcattatgcatg
tcaccaggtaagaagttggacgctcaacccatggaggtggatgcatcgatggtggatgca
agtattcagaaaggagctgatgctattgatgcttttgagcatactgttgaaatcagagca
gatgttcagataggattttctgatctcactgacaacataaatgctacgcttgcaactgta
tctcttgaaactgaagaatgcaaaaaccttagtttttcaaatgatcaaccagtggaagaa
attggaaataatgagcaacatatggggaatgaaactgaggtcctggatgcaaactttggt
tgtgatgacaaggacccaaagtctagttgcttgtttggtgatggagacaacattgctccc
ttaaatggtaaggaaagtctaggttctccggaggctgatctacagagtggcattgaagca
gaagtcaccgcagaacaccctgcagaagattttggtcattttgaagatgtagttttggga
aatgatacagaatttttgaatgtagatgatgatgatatagctgaagatgtcgatgacatg
ccttgtgctgaagacactcgtcttcttgagaacagtgggtggtcttcccgcaccagagcc
gttgccaagtatctccaaactttgtttgataaggaagctgttaatgggaaaagggttctt
ggcatggatagtctgttaaatggtaaaactcgtaaggaagcatcaaggatgttttttgaa
acattggttcttaagacaagggattacatccatgtagaacaggcaaagccctttgacaac
gttaacataaggtctcgagtaaagctcatgaaatcagacttctga
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