Prunus dulcis (almond): 117631565
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Entry
117631565 CDS
T07328
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03440
Homologous recombination
pdul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117631565
03460 Fanconi anemia pathway
117631565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdul03032
]
117631565
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117631565
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117631565
DNA replication proteins [BR:
pdul03032
]
Eukaryotic type
DNA Topoisomerases
117631565
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117631565
FA (Fanconi anemia) pathway
117631565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
117631565
NCBI-ProteinID:
XP_034220690
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Position
1:14505284..14515872
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AA seq
866 aa
AA seq
DB search
MASNKVIMVAEKPSIALSIASVLSRGQMSTRKASTDVHEFEGMFLGFHVHFKVTSVIGHV
FSVDFPEKYQNWTTTDPLDLFQAPIQKTEANPKAHIRRHLSQEARGYGNLVLWLDCDREG
ENICFEVMDCIGHSNETRRRIYRARFSSVTEKDILKAMDNLVEPNKDEALAVDARQEIDL
KVGVAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWAVRPY
IMQKGYELQLEWERNKLFDYDVAVMFQKLVMEDGILEVTEIVEKQESKSRPSGLNTVNLL
KVASSALGFGPQMAMQVAERLYTQGFISYPRTESTAYPSSFDFRGTLGAQVNNPTWGSYV
QRLLADGYQKPRSGTDVGDHPPVTPLRSATEDMLGNDAWRLYEYICTHFIGTVSPDCKYV
RTKVEFSIGGEFFHCVGHRVLVKGFTSIMPWLAVTEKNLPQFTKGEKIEVSQVDLHEGMT
SPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVLAGRKLGPTALGITLIRGY
QCIDPDLCLPDIRSFIEQQITLVAKGQADHFRVVQHVLQQFRQKYSYFVKQIENMDALFE
AQFSPLADSGRVLSKCGKCLRYMKHISTQPSRLYCNTCEEVYYLPQKGSIKLYKELTCPL
DNFELLIFSMPGPDGKSFPLCPYCYNSPPFEGIDTLFGAVKSGPSSQLGKGAGMPCFLCP
HPTCRHSLIAQGVCACPECSGTLVLDPVSAPKWRLCCNMCNFLVLLPEGAHQISTTRERC
PECDSTILEVDFNKKTTPLENGETLYTGCILCDELLHSLVEMKYGKSFFKRMGGRGRGRG
SRRGGYRGRGRGTGKKVDPKMSFRDF
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacaaagttatcatggtggcagagaagcctagcatagctctttctatagcc
tctgttctctcccgtggtcaaatgtctacaagaaaggctagtacggatgtccatgaattt
gagggaatgtttcttgggtttcatgtgcattttaaagtgacatcggttattgggcatgtt
ttcagtgtagattttcctgaaaaatatcaaaattggacaaccactgatcctcttgatctt
tttcaagccccaattcaaaagacagaagcaaatccaaaggctcatattcgcaggcatcta
agccaagaagctcgtggttatggtaacttggttttatggttggattgtgatcgtgaaggg
gaaaatatttgttttgaagttatggattgtattggccattcaaatgagactagaagaagg
atttatcgtgctcggttttcctctgttactgagaaagacattttaaaggccatggacaac
cttgttgaacctaataaggatgaggcattggcagtagatgctcggcaagagatagatttg
aaagttggagttgcatttacacggtttcaaacaagcttttttcaggggaaatacggaaat
cttgattccagagttatctcctacgggccatgtcagactccaacccttggtttctgtgta
caacgctatctgcagataaatacattcaaaccggaaaagttttgggctgtacgcccttac
ataatgcaaaagggctatgaacttcagctagaatgggaacgtaacaagttgtttgactac
gatgttgctgtaatgtttcaaaagttggtaatggaagatggaattctagaagtgactgag
atagtagaaaagcaagaaagcaaaagtcgtccttctggtcttaatacagtcaatcttctg
aaggttgcttcaagtgcactaggctttggaccacagatggccatgcaagttgctgaacgc
ttgtatactcaaggtttcatcagctatccacgtaccgagagcacagcttatccttcttct
tttgactttagaggcacacttggtgcgcaagtaaataacccaacatggggtagttatgtt
cagaggctgcttgctgatggttatcaaaagccacgatccgggacagatgtaggtgaccat
cctcctgttactccattgaggtctgcaactgaggacatgctaggaaatgatgcttggaga
ctatatgagtacatttgtacacacttcatagggactgtatctcctgactgcaaatatgta
agaacaaaggtagaattttcaattggtggagaattcttccattgtgtagggcatcgtgtt
ttggtgaaaggatttacttctatcatgccatggttggcagtaactgagaaaaatcttcct
cagtttacaaaaggggagaaaatagaagtttcacaagtggaccttcatgaggggatgaca
tcacctccagactatctaagcgagagtgagctaatatcccttatggagaaaaatggaatt
ggcacagatgcgtcaatatctgttcatattaacaacatatgtgagcgcaattatgtgcag
gtactagctggcaggaagctgggtccaactgccttaggtattactctaataagaggctat
caatgcatcgatccagatctctgtttgccagatattcgcagtttcatcgagcagcaaatt
actcttgttgctaaggggcaagcagatcattttcgtgttgtgcagcatgtcctacaacaa
ttcaggcaaaaatacagttactttgtcaagcagattgaaaacatggatgcattatttgaa
gcacaattctccccccttgctgactcaggacgagttctcagtaaatgtggcaaatgtcta
cggtacatgaagcacatttccacccaaccttctcgtttgtattgtaatacatgcgaggag
gtttattatcttcctcaaaagggtagcattaagctgtacaaggaacttacttgtcctctt
gacaactttgagctactaatcttctccatgcctggcccggatggcaagtcatttcctctc
tgcccatactgctacaatagtcctccttttgaaggtatcgacacgctctttggtgctgta
aaatctggtccatcaagccagctgggaaagggagctgggatgccatgcttcctatgccca
caccccacatgtcgacattctttgattgcccaaggagtctgtgcctgccctgaatgtagt
ggaacacttgttctagatcctgtgagtgctcccaaatggcggctctgttgcaatatgtgc
aatttccttgtcttgctccccgaaggagctcaccagatttccactactcgagagcggtgc
cctgagtgtgactccacaatcttagaagtggacttcaataagaagacaacacccttggag
aatggagagacgttgtacactggttgcattctttgtgacgaattgctccattcgctagtg
gagatgaaatatggcaaatcatttttcaagcgcatgggtggaagaggaaggggtagagga
tcaaggagaggtggatataggggaagagggcggggtaccgggaagaaggtggatcctaaa
atgagcttccgtgatttctga
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