Prunus dulcis (almond): 117635445
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Entry
117635445 CDS
T07328
Name
(RefSeq) uncharacterized protein LOC117635445
KO
K10756
replication factor C subunit 3/5
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03030
DNA replication
pdul03410
Base excision repair
pdul03420
Nucleotide excision repair
pdul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117635445
03410 Base excision repair
117635445
03420 Nucleotide excision repair
117635445
03430 Mismatch repair
117635445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdul03032
]
117635445
03036 Chromosome and associated proteins [BR:
pdul03036
]
117635445
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117635445
DNA replication proteins [BR:
pdul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117635445
DNA Replication Termination Factors
ELG1-RFC complex
117635445
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117635445
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117635445
Check point factors
HRAD17(Rad24)-RFC complex
117635445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Rad17
Motif
Other DBs
NCBI-GeneID:
117635445
NCBI-ProteinID:
XP_034225654
LinkDB
All DBs
Position
7:15372159..15375825
Genome browser
AA seq
781 aa
AA seq
DB search
MENNWSRHGRYSVTPVKQRRSGYEPSDAETEIPDSPWHGGKMRINVGLEYEGTKAELDLA
RNISPLKQSRRQSSRIEYDGPSLRTNSVVSPVRRRNSSKSPYKPRKDYGNARNSPLAGSD
LHRNMSPLSKSERRRHVSPFQAERGEHDLNGFDDEIVGSNRKQQHHRRNSREEKKPNYSR
RSTTAPRHRSPREVDQQNSYDQTPTKGERSRTPTKVERTPSPLSKNVAQKQRPVNSQMKS
PSVGEINEMLANAKLARTSPNPMSNNKAPVFGSSDSISPGDIFFSRECTVMALPRKVLTK
NGSFESPYSPKRKMVPQGDFAASQHRSRTSGSYDLNGNGRGTPSPYGLSQITTTTSSSAV
SRQSSGTLSVGSSKRSDASGTTTASMRKFTANRMKSESQAWFSCMRKGACKTNKSPERGT
FNEAAFIEKAFVVESLRQFWADKHQPASLTGFTCHKQEAQILKQLVIDNISPHILFTGPS
GSGKKALTMAYLRETYDDSSWEEQKPIQVVVPLTSSAHHVELNVQLEANARYALMGLVRE
INNENAIAPEVSTVNFKANHKVIVLYGVDKAAEHIQHLIKWIMDCYSEACKLILCCENDA
AVIESVKNRCKVIKVDAPVTHEIMEVLIQIARKEDFDLPMSFANKIAIKSKQNLRKAIMG
LEACKAHNYPFGDDQPIPLGWEEVLLELAAEILADPSPKRLFFIRGKFQKLLVDFVHPKL
ILLKLVEQFLKGLHGSSKRELYYWHAYYEKRLPAGASALLKLEEFMAKFMSIYRKSSNNR
Q
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggagaataattggtcaaggcatggtagatattctgtgactccagtgaagcaaaggagg
agtggatatgagccgtctgatgctgagacagaaatcccagatagtccgtggcatggcggc
aagatgaggattaatgttggcttggaatatgaagggacaaaagcagagctggatttggca
agaaacattagccctttgaagcagagcaggaggcagtcttcaagaattgaatatgatggc
ccttctcttagaactaactctgtagtgagccccgttcgaagaagaaatagcagcaagtca
ccctacaagccaagaaaagattatggtaatgcacgaaattcaccgttggcgggttctgat
cttcatagaaatatgagccccttgtcaaaatctgagcgcagaagacatgtttcacctttc
caagctgagagaggagagcatgatttgaatggttttgatgatgagattgtgggctcaaac
agaaagcaacagcatcacagaaggaacagcagagaggagaagaaaccaaactacagtagg
agatcaacaactgctccaagacatagatcaccaagagaagttgaccaacaaaacagttat
gaccaaacaccaactaagggggagagaagtagaacaccaaccaaagtggagagaacacca
tcaccattgtcaaaaaacgtggctcagaaacaaaggccagtgaactcccagatgaaatcg
ccgtccgttggtgaaatcaatgaaatgcttgccaatgcaaagcttgctagaacttctcca
aatcccatgtccaataacaaagctccagtttttggaagctcagactctatatcaccaggt
gacatcttcttttctagagagtgcacagtcatggcattgccaagaaaggtcttgactaaa
aatggtagttttgagagcccgtacagtcccaagcgcaaaatggttccccagggagacttt
gctgcctctcaacacagaagcagaacaagtggtagttatgatcttaatggtaatggtaga
gggactccatccccttatggcttgtcacagataaccactaccacatcaagctccgccgtg
agcaggcagagcagtggtacgcttagcgttggaagcagcaagaggagtgatgcaagtggg
accacaacggcaagcatgaggaaattcacagccaatcgaatgaaaagcgaaagtcaggca
tggttttcgtgtatgagaaagggtgcttgcaagactaacaaatcacctgagcgtggtaca
ttcaatgaagctgcattcattgagaaggcatttgtggttgagagtctcagacagttctgg
gctgataagcaccaacccgcttcgttgactggattcacttgccacaaacaagaagctcaa
attctcaagcaacttgtgattgataacatctctcctcatattttgttcactggaccatct
ggttcggggaagaaggctctaacaatggcttatctacgagaaacatatgatgattcaagt
tgggaagaacaaaagccaatccaagtagtggttccattgacatccagtgctcaccatgta
gagctcaatgtacaattggaagcaaatgctagatatgcattaatgggtttggtcagggaa
ataaacaatgagaatgcaattgctcctgaagtcagcactgttaatttcaaggcaaatcat
aaagtgatagttctttacggtgttgacaaagcagcagaacatattcagcatttgataaaa
tggataatggactgttactcagaagcttgtaagctcatactctgctgtgaaaacgatgca
gctgtcatcgaatccgtgaaaaaccggtgcaaggttatcaaggttgatgctcctgtaact
catgaaattatggaagttcttattcagatagcaaggaaggaagacttcgacctacctatg
agctttgctaataagattgctattaaatcaaagcagaacttgagaaaagcaatcatgggt
cttgaagcatgcaaagcacacaactatccttttggagatgatcaaccaattccgcttgga
tgggaagaggtgctgcttgaacttgctgctgaaatcctagctgatccatcacctaagaga
ttatttttcatccggggaaagtttcaaaagcttctcgttgattttgtgcatccgaaactg
attctactgaagctcgtggaacagttcctgaagggactacatggtagttctaaaagggaa
ctttattattggcatgcttattatgagaaaagactcccagcaggagcgagtgctttactg
aaactagaagaatttatggccaagttcatgagcatataccggaagagttccaacaatcgt
caataa
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