Phytobacter diazotrophicus: HHA33_06760
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Entry
HHA33_06760 CDS
T06586
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz03410
Base excision repair
pdz03430
Mismatch repair
pdz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HHA33_06760 (recJ)
03430 Mismatch repair
HHA33_06760 (recJ)
03440 Homologous recombination
HHA33_06760 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdz03400
]
HHA33_06760 (recJ)
DNA repair and recombination proteins [BR:
pdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HHA33_06760 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HHA33_06760 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HHA33_06760 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
PEP-utilizers
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QJF16260
LinkDB
All DBs
Position
1416361..1418094
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AA seq
577 aa
AA seq
DB search
MKAEIRLRRREANDAADLPADLPPLLRRLYASRGVCSAADLERGVKGMLPWQRLHGIDKA
VEILYNALREGLRIVVVGDFDADGATSTALSVLALRALGGTNIAYLVPNRFEDGYGLSPE
VVDQAHARGAQLILTVDNGISSHAGVERAHALGIPVVVTDHHLPGETLPNAEAIINPNLR
ECDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDERGLAIPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLSDNLGEARVLASELDALNQTRKEIEQGMQAEALTLCEKLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLMLKFGGHAMAAGLSLEEARFEEFQRYFGELVTEWLDPALLQGEIVSDGLLKPDEMTLD
TAEMLRDAGPWGQMFPEPLFDGEFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTT
CWPDNGVRVVNIAYKLDVNEFRGNRSVQLIIDHLWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagccgaaattcgacttcgccgccgcgaggcaaacgacgcggcggatttacctgcc
gatcttcccccacttctgcgtcgcctttatgccagccgcggtgtttgtagcgcggcggat
ctggagcgcggggtgaaaggcatgctgccctggcagcggctgcatggcatcgataaagcg
gtagagatcctctataacgccttgcgcgaggggttgcgtattgtggttgtcggtgatttt
gatgccgacggcgcaaccagtaccgcactgagtgtgctggccttacgtgcgctgggcggc
actaatatcgcctacctggtgccgaaccgttttgaagacggctacgggttaagtccggaa
gtggtggatcaggcacacgcacgcggcgcgcaactgatcctgaccgtggataacggtatt
tcgtcacatgccggggttgaacgggcacatgcgctgggcattccggtggtggtcaccgac
caccatcttcccggcgaaacattgcccaatgccgaagccatcatcaacccgaacctgcgc
gaatgcgattttccgtcaaagtcactggcgggggtgggtgtggccttctatctgatgctg
gcactgcgaacttttttacgcgacaaaggctggtttgatgagcgcgggctggctatccct
aatctggcggaactgcttgatttagtggccttaggtaccgttgccgatgtcgtgccgctg
gatgccaacaaccgcattctgacctggcagggcttaagccgcattcgtgccggaaagtgc
cgtcctggcatcaaagcgctcctggaagtcgccaaccgcgacgcacaaaaactggcggcc
agcgatttaggttttgcgcttggcccacgtctgaatgccgcaggtcgtctggacgatatg
tccgttggcgtggcgctattgctcagtgacaaccttggcgaagctcgggtgctggccagc
gaacttgatgcgctaaaccagacgcgcaaagagattgagcagggcatgcaggcagaggcg
ttgacgctgtgcgagaagctggaacgtagccgcgataccctgccgggtggtcttgctatg
tatcatcccgaatggcaccagggggtagtggggattctggcgtcgcgtattaaagagcgt
ttccaccgcccggttatcgcgtttgcgcctgccggggatggcactttaaaaggctcagga
cgctcaatccagggccttcacatgcgcgatgcgctggagcgtctggatacactctaccca
gggctgatgctcaaattcggcggccatgccatggcggcggggctgtcgcttgaggaggct
cgcttcgaggagttccagcgctactttggcgagctggtcaccgagtggctggatccggca
ctgttgcaaggtgaaatcgtttctgatggcctgttaaaacctgatgaaatgaccctcgat
acagccgaaatgttgcgcgatgctggcccctgggggcagatgttcccggaaccgctgttt
gatggcgaatttcgtcttctgcaacaacggctggtgggggagcgccatcttaaagtgatg
gttgaaccggtcggcggcggcccgctgctcgacggtatcgcttttaatgtcgacaccacc
tgctggcctgataacggcgtgcgcgtcgtcaatatcgcttataaactggatgtgaatgag
tttcgcggcaatcgcagcgtgcaattaatcattgatcacctgtggccaatttaa
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