Primulina eburnea: 140816477
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Entry
140816477 CDS
T11060
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pebu Primulina eburnea
Pathway
pebu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
140816477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pebu03400
]
140816477
DNA repair and recombination proteins [BR:
pebu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
140816477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
140816477
NCBI-ProteinID:
XP_073031920
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Position
1:complement(3114235..3128254)
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AA seq
954 aa
AA seq
DB search
MRTRSQSKRPQSTGEEGAKKTRLLSDIADDRRTLVDISGDAVAKLLRRVKKGSNNEDDVY
LRLCESAAEQGIQLKENKEELLDKTGGKDTADADSCRGDAIEQYYNLDEEYEDSDWEDGS
IPTLSTPKEYQEDLVSGVSVEFDVSPGLAKRKSVRRATSEEKEVAEVVHKCHLLCLLGRG
RLIDGACNDPLIQASLLSLLPTHLLKIAESPKLAASHLSPLVNWFHNNFSVCSPSLAEKT
CHCALASTLETREGTPEAVVALCVALFRALNLKTRFVSILDVISLKPDADKWKFAAEVGK
GQKNIFNSSTPMVGGPSYSSTLSLKSLSDVKESGQTDAKSTYVSETEKSKRNIIKSQVSR
ITAKPKEKMLDELVYKNPYNASESCDVQVEGLKRKGDLEFQMQLEMALSATAVESSKHSM
TSTVLESPSTSSTHSPPYRRTKKIKLEDSQTSSHEISTAIGSRKVGAPIYWAEVFCAGDN
LTGKWVHIDVVNAIVDGESKVEAAAAACKTSLRYVVAFSGNGAKDVTRRYCTQWYKVASQ
RINSTWWDSVLSRLKELESGETGGTVSFGQKALGDEKVEQSVLANLNNGCVLNAKDLDGA
SEEFGEKKAVDSCIEASCNATLSSLEDMELATRALTEPLPTNQLAYKNHHLYAIERWLKK
YQIIYPKGLVLGFCSGHAVYPRTCVQILHTRQMWLREGLQVKADELPAKVLKRSMKQHKK
EVAEDNEYTYANNEKNIDLYGKWQTEPLLLPPPVNGIVPKNERGQVEVWSEKCLPPGTVH
LPFPRIQPVAKRLGIDFAPAMVGFEYRNDRSFPVFEGIVVCEEFNDSILEAYAEEEDRRK
AEERKQDEVRALSRWYQLLSSIVIRQRLNNSYGEGSTSQASFDVPAPGVKYHKLAVGTEK
SDDSPKFPEPKMKSPRNHDHHEHEFTLDEQAFNEDGSTRAKRCHCGFSIQFEEL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccagaagccaatccaagcgaccacaatcgacgggtgaggagggagcaaagaaa
acccgtcttttatcagatatcgctgatgatagaaggactcttgtggatatatctggagac
gcggtggcaaaacttttaagaagagttaaaaaagggtctaacaatgaagatgatgtttat
ttgcggctctgtgaatctgcagctgagcagggaatacaattaaaggagaacaaggaagaa
ttattggataaaacaggaggaaaggatacagcagacgctgattcttgtagaggagatgca
atcgaacagtattataatctcgacgaggaatatgaagattctgattgggaagatggttca
attcctacattatctacaccaaaagaatatcaagaagatttagtcagtggagtttcagtt
gagtttgatgtttcacctggcttggctaagcggaagtctgtgcgaagagccacttcagaa
gagaaggaagtggctgaggttgtgcacaagtgtcatttgctttgcctgttaggaagggga
aggttgattgacggtgcttgcaatgatccactaatccaggcttctcttctttctcttctg
ccaactcacttgctgaagatagcagagtctccaaaacttgcagctagtcatctgtctccg
cttgtcaattggttccacaataacttcagtgtatgtagtccaagtttagctgaaaagaca
tgtcattgcgcattagcatctactttggaaactcgagagggtactccagaagcggttgtg
gctttatgtgtagccttatttagggctctaaatctgaagactcggtttgtctccatttta
gatgtgatatccttgaagccagatgcagacaaatggaaatttgctgctgaagtaggcaag
gggcagaagaatatttttaattcatcaacgccgatggtgggtggaccaagctattcatct
actctctctctcaaatccttgtcagatgtcaaggagagtggtcagactgatgcaaaaagc
acctacgtatctgagacagaaaagtccaaaaggaacataatcaaatcccaagtttctcga
atcactgctaaaccaaaagaaaaaatgttggatgaattagtctacaaaaacccatataat
gcttctgaatcatgcgatgttcaggttgagggattgaagagaaaaggagatcttgaattt
cagatgcagttggagatggcactctcggccactgctgttgaaagttctaaacacagcatg
acatctactgtgttggaatcaccaagcacttcttcaactcattctccaccatatagaaga
acgaagaaaatcaaactagaagactctcaaacttcctcacacgaaatatctacagctatt
ggatccagaaaggtgggagctcccatttattgggccgaggtattttgtgctggagataat
ttgactggaaaatgggtgcatattgatgttgtaaatgcaattgttgatggagagagtaag
gtagaagctgcagctgctgcatgcaaaacatcattgagatacgtggttgctttttctgga
aacggggctaaagacgtgacacgcagatattgtactcaatggtacaaggtagcatcacaa
aggatcaattcgacctggtgggattctgtgttgtcacgattgaaggagttggagtcaggt
gaaaccggtggcactgtcagttttggtcagaaagctttaggtgatgagaaggttgaacaa
tctgtattagcaaatctgaataatggatgtgttctaaatgctaaagatttagatggagcg
tctgaagaatttggtgagaagaaggctgttgattcctgtatagaagcctcgtgtaatgct
actttgagctctcttgaagatatggaattagcaactagagcactaactgaaccacttccc
accaatcaacttgcttacaaaaatcatcatttatatgcgattgaaagatggcttaagaag
tatcagataatttatcccaagggacttgtgttgggcttttgttccgggcatgctgtatat
ccacgcacttgtgtccaaatacttcatacgagacagatgtggttgcgtgaggggctgcaa
gtcaaagctgatgaacttcctgctaaggttctgaagcgctctatgaagcaacataagaag
gaagtggcagaagacaatgaatatacttatgccaacaatgaaaagaatatcgatctatat
gggaagtggcaaactgaaccattgttgcttcctcctcctgttaatgggattgttcctaag
aatgaacgcggtcaagtggaggtgtggtctgagaaatgcctcccaccaggtacagtccac
ttgccttttccaaggatacaacctgttgcgaaaaggctcggtatcgattttgcccctgct
atggttggatttgaatacagaaatgatcgatcctttcccgtctttgagggtattgttgtt
tgtgaagaatttaatgattccattctagaggcatatgcagaggaggaagatagaaggaag
gctgaagagagaaaacaggacgaggtacgggcactttcaaggtggtaccagcttctttct
tccatagtcattcggcagagattgaacaacagctacggggaaggatcaacatcacaagcc
tcttttgacgtcccagcacctggtgttaagtatcataaattagctgtcggtaccgagaaa
agtgatgattctccaaaatttccggagccaaaaatgaaatcaccaagaaaccatgaccac
cacgaacacgaatttactttagacgagcaagcattcaatgaagatggctcgacaagagcg
aagcgatgccattgtggattctcaattcagttcgaggaattgtag
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