Primulina eburnea: 140826549
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Entry
140826549 CDS
T11060
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pebu Primulina eburnea
Pathway
pebu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140826549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140826549
03036 Chromosome and associated proteins [BR:
pebu03036
]
140826549
Transcription machinery [BR:
pebu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140826549
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140826549
PBAF complex
140826549
GBAF(ncBAF) complex
140826549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
140826549
NCBI-ProteinID:
XP_073045035
LinkDB
All DBs
Position
3:12869483..12872584
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AA seq
531 aa
AA seq
DB search
MSANSGNPPKNVGASPPFMNSFPVNPSGQQQVSPGFPGQFQLSQLSATQIQAIAQAQSKA
QAQAAHAQFQAQLQAAQGIAFNQAHAGGISNMGSPSPSISGAGSAGAKWFSQKPPVRPTF
SPPTYSPSPMRPMDAAAAAARKKKQKLPEKQLQERVAAILPESALYTQLLEFESRVDAAL
TRKKIDIQEALKTPPCIQKMLRIYVFNTYANQIRTIPKKPNAESPTWTLNIVGRIVEEGM
DPEQTALMQPSPVNPKFSSFFKRVTITLDQKLYPDNHLIIWDSARSPAPHEGFEVKRKGD
QEFTASIRLEINYVPEKYKLAPALVDVLGIEVDTRARIMAAVWHYVKARKLQCPDDPSSF
NCDPPLRKVFGETRTKFTTVAQRITQHLFPPQPIHLEHRIKLSGNTPVGTACYDVLVDVP
FPIQRELHALLANTEKTKEIDGCDEAICAAIRKIHEHRRRRAFFLGFSQSPIEFINKLID
SQNRDLKLVTGEASRNAEKERGSDFYSQPWVEDAVIRYLNRKPPADVPAST
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaatagcggtaacccaccaaagaatgttggagcttcacctccctttatgaat
tcttttcccgtgaatccatctggtcagcaacaagtgtcaccaggctttccaggtcagttt
cagctgtcccagctttctgcaactcagatccaagccattgctcaggcccagtcaaaggct
caggcccaagcagctcacgcgcaattccaagcccagttgcaagctgctcagggcattgca
tttaaccaggctcatgctggagggatttcaaacatgggctcaccatcaccttctatttcg
ggagctggaagtgccggtgccaaatggttttcccaaaaaccacctgtgcgaccaaccttc
tcccccccgacttactcgccctctcctatgaggccaatggatgctgctgctgctgctgct
cgcaagaaaaagcagaagctccctgagaaacagttacaagaaagagttgcagccatttta
cctgaatcggctctttacactcaactcttggagtttgagtctcgtgtggatgctgctttg
acaaggaagaaaattgatatccaagaggctctcaagacccctccctgtattcagaaaatg
ctccgtatttatgtgtttaacacttatgccaatcagattcgcacaattccaaagaagcca
aatgcggagtcacctacgtggacccttaatatagtagggaggattgtggaggagggaatg
gatcctgaacaaactgccctcatgcaacccagccctgtgaatccaaagttctcttcattt
tttaaaagagttactatcacattagaccagaaactatatcctgacaatcatttaatcata
tgggacagcgctagatcacctgctcctcacgaaggcttcgaagtcaaaagaaaaggggac
caagaatttactgcgagcatacggctagagataaattatgtgcctgagaagtataagcta
gcaccagcacttgttgatgtcttaggtattgaggttgatacccgcgcaagaataatggct
gcagtctggcactatgttaaggctagaaaattgcagtgcccagatgacccatcttctttc
aattgtgatccaccccttcggaaagtatttggcgaaaccaggaccaagttcactacggtt
gcgcaaagaattacacagcacctttttcctccacagcccatacatttagagcacagaata
aaactgtcaggaaatactcctgttgggactgcatgttatgatgtgctagttgatgtaccc
ttcccaattcagagagaattgcatgctttattagccaataccgaaaaaaccaaagagatt
gatggctgtgatgaagcaatttgtgctgctataagaaagatccatgagcaccggcgaaga
cgagcattttttcttggatttagccagtctccgattgagtttattaataaacttattgat
tctcaaaacagggatcttaagcttgttactggtgaagcaagtcgcaatgcagaaaaagag
cgtggatcagatttctacagccaaccttgggttgaagatgctgtcattcggtacttgaac
cgaaagccaccagcagacgttcccgcaagcacttga
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