Primulina eburnea: 140827817
Help
Entry
140827817 CDS
T11060
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140827817
Enzymes [BR:
pebu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140827817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
LmjF365940-deam
Motif
Other DBs
NCBI-GeneID:
140827817
NCBI-ProteinID:
XP_073046765
LinkDB
All DBs
Position
3:50335932..50341573
Genome browser
AA seq
439 aa
AA seq
DB search
MWSSRRCLCSLLLLGLLAGAMASVPILSSEENGELQSSTASTMAASLDEEALNEHAMDDP
EEVARSVEMATHNSTMRRKLGYFSCVTGNPIDDCWRCDNKWQLNRKRLADCGIGFGRNAI
GGRDGEFYVVTDPGDDNPVNPRPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTI
DGRGVNVHIANGGCITIQFVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAIS
IFGSSHIWVDHNSLSNCADGLVDAVMGSTSITISNNYFTHHNEVILLGHSDSYMRDKQMQ
ATIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPVNP
FAKEVTKRVDTPKGRWKGWNWRSEGDLLLNGAFFTPSGAGAGAHASYARASSLGAKSSSM
VGSITYGAGALACRSGRQC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcttccaggagatgcctgtgttctctacttcttctcgggttactcgccggagct
atggctagtgtcccgatattgagttctgaggaaaacggggagcttcagagctccacagcc
tcaacaatggcggcaagtttggatgaggaagctttgaatgaacatgcaatggatgaccca
gaagaagttgcgagatctgttgaaatggcaacgcataacagtacgatgaggaggaaacta
ggatatttctcatgcgtgacgggcaaccccatcgatgactgctggcgttgcgacaacaag
tggcagttgaaccgcaagcgactcgcggactgtgggattggttttgggcgaaatgcgata
ggtggtcgtgatggagaattctatgtggtaacagaccctggtgacgataaccccgtaaac
cctagaccgggcactctacgccatgctgttatacaggatgagcctctgtggatcatattc
aagcgcgacatggtcataacattgaagcaagaactcatcatgaatagtttcaagacgatc
gatggtcgtggggtaaacgtgcatattgcaaatggagggtgcattacaatccagtttgtc
acgaatgtcatcatccacggcctccatatccacgactgtaggccgactgggaacgccatg
gtgaggagctccccttcgcattatggatggaggactatggcggatggcgatgcgatttca
atctttggctccagtcacatctgggttgatcacaattcgctctccaactgcgctgacggg
cttgttgatgctgttatgggatccacttctattaccatttcgaacaactatttcacccac
cataatgaggtgattttgttgggtcatagtgattcttatatgagagacaagcaaatgcag
gcaacgatcgcgtataatcatttcggggaaggccttatccagagaatgcctaggtgcaga
catggatacttccatgtggtgaacaatgactacactcattgggagatgtacgccatcggc
ggaagtgcaaatcctaccatcaacagccaagggaaccgatacctcgccccggtcaaccct
tttgcgaaagaggtgacaaaacgggtcgacacacccaagggtagatggaagggatggaac
tggagatcggagggtgaccttttgctcaatggagctttttttacaccctctggagctggg
gctggagctcatgccagctatgctagggcttcaagcttaggggctaaatcttcctccatg
gttggatctattacatatggtgctggtgccctcgcctgccgttcaggccgccagtgctaa
DBGET
integrated database retrieval system
