Primulina eburnea: 140837051
Help
Entry
140837051 CDS
T11060
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140837051
Enzymes [BR:
pebu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140837051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140837051
NCBI-ProteinID:
XP_073059139
LinkDB
All DBs
Position
7:complement(7266512..7268844)
Genome browser
AA seq
410 aa
AA seq
DB search
MASAFSSATFPFLLLFFCTLLPSLIASSAAVQDPELVVQEVHRRLNDSRRKLGFLSCNTG
NPIDDCWSCDSNWEQNRQKLADCAIGFGKNAIGGRDGKIYVVTDSSDDDAVNPKPGTLRY
AVIQEEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIANGPCITIQYVTNIIIHGI
NIHDCKQGGNAMVRDSTKHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIHGS
TAITLSNNYLTHHDKVMLMGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN
NDYTHWEMYAIGGSASPTINSQGNRFLAPDDRFNKEVTKHEDAPESEWKNWNWRTEGDLM
LNGAFFTTSGAGASSNYAKASSLGARPSSMISSITGRAGALSCRKGSRCS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggctttctcttctgccacattcccatttcttcttctcttcttctgcacgctt
ctcccgtctctcattgcctcctctgcggctgtgcaagaccctgaattggtggtccaagaa
gtacacaggaggttgaatgattctagaaggaaactgggattcttgtcatgcaacacgggt
aatcccatagacgactgctggagttgtgactccaattgggagcagaaccgtcagaaactg
gcggactgcgccatcggattcggcaagaacgccattggcggaagagacggcaagatttac
gtcgtgacggactcgagcgacgacgacgcggtcaatccgaagcccgggacgctccgctac
gcggtcattcaagaagagccgttgtggatcatatttgcccgggacatggttatcaaattg
aaggaggaactgataatgaactcgtttaagaccattgatggcaggggtgcaagtgttcac
attgctaatggtccttgcatcactatacaatacgtgacgaatattattattcacgggatc
aatatacacgactgtaagcaaggtgggaatgctatggtgagggactccaccaagcactac
gggtggaggaccatatcggacggtgacggcgtgtcgatcttcggcgggagccacgtgtgg
gttgaccattgctcgttgtcaaattgcaaagacgggctgatcgacgccatacacgggtcg
accgcgattaccctttcgaataattacttgactcatcatgacaaggtcatgcttatgggg
cacagtgattcctacactcaagacaagaatatgcaagttactattgcctttaaccacttt
ggtgaaggacttgttcaaagaatgccaagatgtagacatggttatttccatgtggtgaac
aatgactacacccattgggagatgtatgcaattggaggtagtgcgtcgcctaccatcaat
agccagggcaatagatttctagcccctgatgacagattcaacaaggaggtgaccaagcat
gaggatgcaccggagagcgagtggaagaattggaattggaggacagaaggagacttgatg
ttgaacggggcattctttacgacgtcgggtgccggagcatcctcgaactatgccaaggcc
tcgagtttaggtgctaggccttcttccatgataagctccatcactggccgtgccggcgcc
ctgagctgtagaaagggatcgcggtgtagttaa
DBGET
integrated database retrieval system
