Pectobacterium parmentieri SCC3193: W5S_0002
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Entry
W5S_0002 CDS
T02514
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec03030
DNA replication
pec03430
Mismatch repair
pec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
W5S_0002
03430 Mismatch repair
W5S_0002
03440 Homologous recombination
W5S_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pec03032
]
W5S_0002
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_0002
Enzymes [BR:
pec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
W5S_0002
DNA replication proteins [BR:
pec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
W5S_0002
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
W5S_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AFI88141
UniProt:
A0A0H3HWE8
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All DBs
Position
1403..2503
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AA seq
366 aa
AA seq
DB search
MKFIVERERLLKPLQQVSSPLGGRPTLPILGNLLIQVTEGALSLTGTDLEMEMVAKVALT
QPHEPGATTVPARKLFDICRGLPEGAEITIMLDGDRMLVRSGRSRFSLSTLPAADFPNLD
DWQSEVEFSLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPVGQSLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKTLEASCDLLKQAFSRAAILSNEKFRGVRLHLIQNQLKITANNPEQE
EAEEILDVQYDGTEMEIGFNVSYVLDVLNALKCEGVRLLLTDSVSSVQIEDSASRAAAYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgttgaacgcgaacgtctgttaaagccattacaacaggtcagcagcccg
ctgggcggtcgaccgactttaccgattttgggcaacctactgattcaggtgacggaaggc
gcattgtcgctgaccggtaccgatctggaaatggagatggtggcgaaagtagcgctgacg
cagccgcatgagccgggtgccacgaccgttcctgcccgtaaactgtttgatatttgccgg
ggcctgccagaaggcgcagagatcaccatcatgctggatggcgatcgtatgctggtgcgc
tctggacgcagccgcttctcgctgtccacgttacctgcggcggatttccctaatctggac
gactggcagagcgaggttgaattttctctgccacaggcgacgatgaagcgtttgatcgaa
gcgacgcagttttcgatggcgcatcaggacgtgcgttattacctcaacggcatgctgttt
gaaaccgaaggtgaagagctgcgcacggtcgcgactgatggccaccgtttggcggtttgt
tcgatgccggttgggcaatctttgccctcacattcggtgatcgtgccacgtaaaggcgtg
atggaactggtgcgcttgctagatggtggtgatacgccgctgcaactgcaaattggcagc
aacaatattcgtgcgcatgttggtgactttattttcacgtcgaagctggtcgatggtcgc
tttcctgattatcgccgcgtattgccgaagaacccggataaaacgctggaagctagctgc
gacttgctcaagcaagctttctcccgggccgcgattttgtcgaatgaaaaattccgcggt
gtgcgtctgcatctgattcagaatcagctcaaaattactgctaacaacccagagcaggaa
gaagcggaagagattctggatgtgcagtatgacggcaccgagatggagatcggctttaac
gtcagctacgtactggatgtgctgaacgcgctgaagtgcgagggtgtgcgtttgctgctg
accgattccgtttccagcgtgcagattgaagatagcgccagccgagcggcggcctatgtc
gtcatgccaatgcggttgtag
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