Pectobacterium parmentieri SCC3193: W5S_2102
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Entry
W5S_2102 CDS
T02514
Name
(GenBank) Isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00020
Citrate cycle (TCA cycle)
pec00480
Glutathione metabolism
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
pec01120
Microbial metabolism in diverse environments
pec01200
Carbon metabolism
pec01210
2-Oxocarboxylic acid metabolism
pec01230
Biosynthesis of amino acids
Module
pec_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pec_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
W5S_2102
09106 Metabolism of other amino acids
00480 Glutathione metabolism
W5S_2102
Enzymes [BR:
pec01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
W5S_2102
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-ProteinID:
AFI90191
UniProt:
A0A0H3I8D5
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All DBs
Position
2286020..2287273
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AA seq
417 aa
AA seq
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MESKVVVPTEGQKITVDAQGKLVVPNNPVIPFIEGDGIGIDVTPAMINVVDAAVKKAYQG
KRAISWMEIYTGEKSTQVYGKDVWLPDETLDLIREYRVAIKGPLTTPVGGGIRSLNVALR
QQLDLYVCLRPVRYYEGTPSPVKQPELTDMVIFRENAEDIYAGIEWKAGSAEADKVIKFL
REEMGVSKIRFPEQCGIGVKPCSEEGTKRLVRAAIEYAITNDRDSLTLVHKGNIMKFTEG
AFKDWGYQLAREEFGGELIDGGPWVKIKNPNTGKDIVVKDVIADAFLQQILLRPAEYDVI
ACMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSVILS
AEMMLRHLQWFEAADLIVKGVEGAIKNKTVTYDFERLMEGATLRKCSEFAQDIIDNM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaagtagttgtaccgacagaaggtcagaaaatcacggttgatgctcaaggc
aaactggttgttccgaataatccagttatcccgtttatcgaaggtgacggcattggtatc
gatgtaacgcctgctatgatcaacgtagtagacgccgctgtgaagaaagcctatcagggc
aagcgcgcgatttcctggatggaaatctatacgggtgagaaatccacgcaagtttacggt
aaagatgtttggttgccggatgaaacactggatttgatccgtgaataccgtgtggcgatt
aagggcccgctgacaacgccagttggtggtggtattcgttctctgaacgttgcgctgcgc
caacagttggatctgtacgtttgcctgcgtccggtacgctactacgaaggtacacctagc
ccggttaaacagcctgagctgactgacatggtgatcttccgcgaaaacgccgaagacatt
tatgccggtattgagtggaaagcgggttctgctgaagcagacaaagtgatcaaattcctg
cgtgaagaaatgggcgttagtaaaatccgtttccctgagcagtgtggtatcggcgtcaag
ccgtgctctgaagaagggaccaaacgcctggttcgcgctgcgatcgagtacgcgattacc
aacgaccgtgattccctcacgctggtgcataaaggcaacatcatgaaattcaccgaaggc
gcgtttaaagactggggttaccagttggcgcgtgaagaattcggcggtgaactgatcgat
ggcggtccgtgggtgaagattaagaacccgaacaccggcaaagatatcgtggtaaaagac
gtgatcgctgacgcattcctgcaacaaatcctgctgcgccctgctgaatatgacgtgatc
gcctgtatgaacctgaacggtgactatatttctgatgcactggcggcacaggttggcggt
atcggtattgctccgggtgcaaacatcggtgacgaatgcgcactgtttgaagccacgcac
ggtacggcaccgaaatatgctggtcaggataaagtgaacccaggttccgttattctgtct
gctgaaatgatgctgcgtcacctgcaatggttcgaagcggctgacctgattgttaagggc
gttgaaggcgcgatcaagaataagaccgtgacttacgatttcgaacgtctgatggaaggc
gctacgctgcgtaaatgtagcgagtttgcgcaagacatcatcgataacatgtaa
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