Pectobacterium parmentieri SCC3193: W5S_2476
Help
Entry
W5S_2476 CDS
T02514
Name
(GenBank) Urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00220
Arginine biosynthesis
pec00791
Atrazine degradation
pec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
W5S_2476
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
W5S_2476
Enzymes [BR:
pec01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
W5S_2476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_5
ATP-grasp
HlyD_D23
RnfC_N
NQRA
T2SSM_b
Motif
Other DBs
NCBI-ProteinID:
AFI90564
UniProt:
A0A0H3I5N8
LinkDB
All DBs
Position
complement(2663449..2667063)
Genome browser
AA seq
1204 aa
AA seq
DB search
MFKTVLIANRGEIACRAIRTLKRLGITSVAIYSDADKNAQHVKDADIAVSIGGEKASDSY
LCIDKVLSAAQQTGAEAIWPGYGFLSESLPFAAACEKAGIAFVGPTAQQIGEFGLKHRAR
ELAAAAGVPMTPGTPLLASLEEARVAAEEIGYPVMLKSTAGGGGIGLTRCADTAALHAAW
ESVRRLGEQFFSDSGVFLERCIDRARHVEVQIFGDGKGRVVALGERDCSLQRRNQKVVEE
TPAPHLPDATRAALLASAVKLGELVNYRSAGTVEFIYDAERDAFFFLEVNTRLQVEHPVT
ECVTGLDLVECMLRVAADEPLDWAQFAQLRRGAAIEVRIYAEDPLKNFQPSPGVLTEVAF
PDDVRVDGWVSTGTEVSTYYDPMIAKLIVHEETRELALEKMQQALNATRLHGIATNLDYL
RQIITTDAFRSGTVWTRMLDSFTPSASVIEVIHPGTWSSVQDYPGRLGYWDIGVPPSGPM
DDFAFRLANRIVGNDAAAAGLEFTLQGPTLRFHSTAVIALTGADCPAMLDGDIVPYWQPV
TIMAGQTLTLGRAQSGCRTYLAVRNGIDVPQYLGSRSTFALGEFGGHAGRTLRVADMLAI
SQPTLPACTTPAPVSAPQAVDTALIPQYGNDWRIGVLYGPHGAPDFFTHAAIDEFFAAEW
QVHYNSNRLGVRLVGPKPSWTRANGGEAGLHPSNVHDCEYAIGAVNFTGDFPVILTRDGP
SLGGFVCPVTIAKAELWKVGQVKPGDRIRFHPISAEEALALEQAQSACVSTLGVAHAPAF
DVPSLATTEHGSATVLAAVQATTTTPAAVYRQAGDNYILIEYGENVLDLALRLRIHLLMV
AIRASETVGIEELSPGVRSLQVRYDSRILRQRALLDVLLHLESQLGDVSQMTVPSRIVHL
PMAFEDSATLGAVERYRETVRARAPWLPNNVDFIQRINGLSSRDDVRDIIFDASYLILGL
GDVYLGAPCAVPVDPRHRLLSSKYNPARTFTAEGTVGIGGMYMCIYGMDSPGGYQLVGRT
LPIWNKFLKNDQFITDEPWLLRFFDQVRFYPVSEGELTTLREDFREGCAAIHIEETTFDF
AEHTRFLTEQAEDIAAFRQRQASAFETEVALWQQEEDSTPQEDILITPVENDEDAFQVSA
DMNGNIWKVLVNVGDAIEAGQPLIIVEAMKMELTITAPQSGRVKRIGCLPGRPVRPGDAL
LWLE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaccgtactgattgctaaccgcggtgagatcgcctgccgcgcgattcgcacg
ctgaagcgcttggggattaccagcgtggcgatatattccgatgcggataaaaacgcgcag
catgtgaaagatgccgatatcgccgtatcgattggtggggaaaaggccagcgacagctat
ctgtgtatcgataaagtgctttcggcagcacaacagacgggggccgaagcgatctggccg
ggctacggttttctatccgaaagcctgccgtttgccgccgcgtgtgaaaaagcgggtatc
gcgtttgttgggccaacggcgcagcaaattggcgagtttggcctgaagcaccgcgctcgt
gaattggctgccgccgctggtgtgccgatgacaccgggaacgccgctgttggcctcactg
gaggaggcacgggtcgcggcagaggagatcggctatccggtcatgctgaaaagtaccgcc
ggtggcggggggattggcctgacgcgctgtgcggataccgccgcacttcacgcggcgtgg
gagagcgtgcgccggttgggcgagcagttctttagcgattccggcgtatttctcgaacgc
tgcatcgatcgggcccggcatgtagaagtacagatttttggcgatggcaaaggccgcgtg
gtagcgctgggcgaacgtgattgttcattgcagcggcgtaaccagaaagtggtggaagaa
acgcccgcaccgcatttgccggatgctacacgcgcggcgctactggcttcggcggtaaaa
cttggtgaactggtcaactaccgcagcgcgggaactgtggaatttatctacgacgccgaa
cgggatgcattctttttcctcgaagtgaatacccgtttacaggttgaacatccggtgacg
gagtgtgttaccgggctggatttggtcgaatgcatgctgcgcgttgcagcagatgaaccg
ctggattgggcgcagttcgcacaactccggcgtggcgcggcgattgaagtgcgtatttat
gcggaagatccgctgaaaaacttccagcccagtcccggcgtactgaccgaagtggcgttt
cctgatgacgtgcgggttgacggctgggtgagcactggcaccgaggtgtcgacatattac
gatccgatgatcgccaaactgatcgttcatgaggaaacccgtgaactggcgttggagaag
atgcagcaggcgctgaacgctacacgtttgcacggtattgccaccaatctggattatctg
cgccagattatcaccaccgacgcgttccgtagtggaacggtatggacgcggatgctcgat
agctttacgccgtctgcgtcagtgattgaagtgattcaccccggtacctggagcagcgtg
caggattatcctgggcggctcggctattgggatatcggcgtgccaccgtccggtccgatg
gatgatttcgcgttccggttggcgaatcgcatcgtaggtaacgatgcggcagcggcaggg
ctggaatttacgctacaagggccgacgctgcgtttccacagtacagcggtgattgcgctg
acgggggctgactgcccggccatgttggatggtgacatcgtaccctattggcagcccgtt
acgatcatggctgggcaaacgctgacgctggggcgtgcgcagtctggctgccgcacttat
ttggcggtacgcaacggcattgatgtgccgcaatatctcggcagccgttcgactttcgca
ctcggagaatttggcggtcatgcaggaagaacgttgcgcgtggcggatatgctggcgatt
tcgcaacccacattgccagcctgcaccacgcccgcgccagtgagcgccccgcaggccgtg
gataccgcgctgatcccacagtatggcaacgactggcggattggcgtgctctacggcccg
catggtgcaccggatttctttacccacgcggcgatcgacgaatttttcgcggcggaatgg
caggtgcattacaactcgaaccgattgggcgtgcgtctggtgggaccaaaaccaagctgg
acgcgggcgaacggcggcgaagctggcttacatccctctaacgttcacgattgcgagtac
gccatcggcgcggtgaattttaccggcgacttcccggtgatcctcacgcgagatgggccg
agtctgggcgggtttgtctgcccggtcacgattgccaaagcggaactgtggaaagtcggt
caggtgaaaccgggcgatcgtatccgttttcatcccatcagcgcagaggaggcactggcg
ctggaacaggcgcagtctgcctgcgtgtccacgttgggcgtagctcacgcgcctgccttt
gatgttccctcgttggcgacgacagaacatggttccgccacggtgctggctgccgtgcag
gccacgacgaccacgccagccgccgtttaccgtcaggcaggtgataactacattctgatc
gaatacggtgagaacgtgttggatctggcgctgcggctgcgtattcatttgctgatggtt
gccattcgtgcttctgagacggtaggaatagaggaactgtcacctggtgtgcgttcgcta
caggtgcgttatgacagccgaattctccgccagcgtgcactactggatgtgttactgcat
ctggaaagccagctcggtgacgtcagccagatgaccgtgccgtcgcgcatcgtccatttg
ccgatggcgtttgaagatagcgccacgctcggtgcggttgaacgctaccgtgaaacggta
cgcgcccgtgcgccctggctgccgaataacgtcgatttcattcagcgtattaacggctta
tcgagccgtgatgatgtgcgcgacatcatttttgatgccagctacctgattctgggactg
ggcgacgtttatctcggcgcgccctgtgcggtgccggtcgatccacgccaccgtttgctg
agttccaaatacaaccctgcgcgcaccttcactgccgaaggcacggtcggcatcggcggc
atgtacatgtgcatctatggcatggattcgccgggcggctatcagttagtgggacgcacg
ctgccgatctggaacaaattcctcaaaaacgatcagttcatcaccgatgaaccgtggctg
ctgcgcttcttcgatcaggtgcggttttatccggtcagcgaaggcgaattgacgacgctg
cgtgaggatttccgcgaaggctgcgccgcgatccacatcgaagaaaccacgtttgatttc
gctgaacacacgcgttttctgaccgaacaggctgaagatattgccgcgtttcgccagcgt
caggcttctgcatttgaaaccgaagtggcgctgtggcagcaggaggaggacagcacgccg
caggaagacattttaatcacgcctgtagaaaacgacgaagacgcttttcaggtcagtgcg
gacatgaacggtaatatctggaaagtactggtgaatgtcggcgatgccattgaagccggc
cagccgctgattatcgttgaagccatgaaaatggaactgacgataacggcaccgcagtct
ggccgagtgaaacgcatcggctgtttgccggggcgaccagtcaggcccggtgatgcctta
ctgtggcttgaataa
DBGET
integrated database retrieval system
